Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TIMMDC1Q9NPL8 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TIMMDC1Q9NPL8 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TIMMDC1Q9NPL8 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TIMMDC1Q9NPL8 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.98□□□□□ -0.17
TIMMDC1Q9NPL8 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.98□□□□□ -0.17
TIMMDC1Q9NPL8 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TIMMDC1Q9NPL8 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TIMMDC1Q9NPL8 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TIMMDC1Q9NPL8 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TIMMDC1Q9NPL8 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TIMMDC1Q9NPL8 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TIMMDC1Q9NPL8 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TIMMDC1Q9NPL8 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TIMMDC1Q9NPL8 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TIMMDC1Q9NPL8 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 FAM90A12P-201ENST00000519497 2375 ntBASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 FAM90A24P-201ENST00000520792 2369 ntBASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 AHCYP2-201ENST00000430630 1300 ntBASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 AC006001.1-201ENST00000325130 474 ntBASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 CD8B2-202ENST00000417670 633 ntBASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 ARL4AP4-201ENST00000434170 518 ntBASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 MIR6799-201ENST00000620297 69 ntBASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 AL033527.4-201ENST00000641026 673 ntBASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TIMMDC1Q9NPL8 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TIMMDC1Q9NPL8 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TIMMDC1Q9NPL8 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TIMMDC1Q9NPL8 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
TIMMDC1Q9NPL8 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TIMMDC1Q9NPL8 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TIMMDC1Q9NPL8 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TIMMDC1Q9NPL8 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TIMMDC1Q9NPL8 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
TIMMDC1Q9NPL8 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TIMMDC1Q9NPL8 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TIMMDC1Q9NPL8 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TIMMDC1Q9NPL8 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.96□□□□□ -0.17
TIMMDC1Q9NPL8 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TIMMDC1Q9NPL8 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TIMMDC1Q9NPL8 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms