Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 AC008622.3-201ENST00000621170 600 ntBASIC12.95□□□□□ -0.34
CHD8Q9HCK8 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 HNRNPA1P69-201ENST00000552536 933 ntBASIC12.95□□□□□ -0.34
CHD8Q9HCK8 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 AC012313.2-201ENST00000599952 1154 ntTSL 5 BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 AL137028.2-201ENST00000614601 256 ntBASIC12.95□□□□□ -0.34
CHD8Q9HCK8 AC026120.2-201ENST00000617239 309 ntBASIC12.95□□□□□ -0.34
CHD8Q9HCK8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 KIR2DL1-201ENST00000291633 1203 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 REG3A-201ENST00000305165 718 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 TPM3P7-201ENST00000338274 732 ntBASIC12.94□□□□□ -0.34
CHD8Q9HCK8 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 AC012066.1-201ENST00000439252 694 ntBASIC12.94□□□□□ -0.34
CHD8Q9HCK8 C5orf38-203ENST00000457752 387 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 RN7SL148P-201ENST00000467120 279 ntBASIC12.94□□□□□ -0.34
CHD8Q9HCK8 GOLGA2-210ENST00000490628 428 ntTSL 2 BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 RACK1-227ENST00000512805 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 COMMD10-207ENST00000632434 1433 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 PPP4R1L-201ENST00000244070 1474 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 OR6N1-201ENST00000335094 1027 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 AC234771.1-201ENST00000416873 250 ntTSL 2 BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 AC017081.1-201ENST00000420063 823 ntBASIC12.94□□□□□ -0.34
CHD8Q9HCK8 MRPL45P2-201ENST00000425159 927 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 JPT1-205ENST00000470924 663 ntTSL 5 BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 PXN-AS1-205ENST00000542314 707 ntTSL 2 BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 NKAPP1-203ENST00000554109 573 ntTSL 4 BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 BRCA1-225ENST00000586385 781 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC12.94□□□□□ -0.34
CHD8Q9HCK8 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC12.94□□□□□ -0.34
CHD8Q9HCK8 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHD8Q9HCK8 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHD8Q9HCK8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CHD8Q9HCK8 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CHD8Q9HCK8 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.93□□□□□ -0.34
CHD8Q9HCK8 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms