Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 AC009093.2-202ENST00000620513 2079 ntBASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 AC007389.4-201ENST00000454674 793 ntBASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 AC027601.3-201ENST00000622907 509 ntBASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR2J2Q9GZM3 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 AC114271.1-201ENST00000612689 2813 ntBASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 CRB3P1-201ENST00000449338 276 ntBASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 MIR4745-201ENST00000577608 62 ntBASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 OR10B1P-201ENST00000601666 907 ntBASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 ECM1P1-201ENST00000604092 1279 ntBASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.35□□□□□ -0.27
POLR2J2Q9GZM3 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms