Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RPAP1Q9BWH6 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPAP1Q9BWH6 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPAP1Q9BWH6 FER1L4-210ENST00000615531 5998 ntBASIC17.36■□□□□ 0.37
RPAP1Q9BWH6 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPAP1Q9BWH6 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
RPAP1Q9BWH6 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC17.36■□□□□ 0.37
RPAP1Q9BWH6 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPAP1Q9BWH6 RPS9P1-201ENST00000419943 583 ntBASIC17.36■□□□□ 0.37
RPAP1Q9BWH6 DUTP3-201ENST00000450025 415 ntBASIC17.36■□□□□ 0.37
RPAP1Q9BWH6 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC17.36■□□□□ 0.37
RPAP1Q9BWH6 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RPAP1Q9BWH6 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC17.36■□□□□ 0.37
RPAP1Q9BWH6 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC17.36■□□□□ 0.37
RPAP1Q9BWH6 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPAP1Q9BWH6 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
RPAP1Q9BWH6 AC015909.3-201ENST00000572855 1794 ntBASIC17.36■□□□□ 0.37
RPAP1Q9BWH6 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RPAP1Q9BWH6 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RPAP1Q9BWH6 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.36■□□□□ 0.37
RPAP1Q9BWH6 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RPAP1Q9BWH6 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPAP1Q9BWH6 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPAP1Q9BWH6 DDC-213ENST00000617822 1809 ntTSL 3 BASIC17.36■□□□□ 0.37
RPAP1Q9BWH6 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPAP1Q9BWH6 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 SOD2-202ENST00000367054 815 ntTSL 2 BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 AL583805.1-201ENST00000391389 531 ntBASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 PFN2-202ENST00000423691 911 ntTSL 2 BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 AP002803.1-201ENST00000528836 498 ntBASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 AC135983.4-201ENST00000564116 1262 ntBASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 AC093752.3-201ENST00000567343 901 ntBASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 AC124068.2-201ENST00000569473 1109 ntBASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 AC090643.2-201ENST00000623442 2029 ntBASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RPAP1Q9BWH6 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 AP000356.3-201ENST00000382243 753 ntBASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 NAGK-204ENST00000443872 878 ntTSL 3 BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms