Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 SNORD3B-1-201ENST00000577988 758 ntBASIC15.34■□□□□ 0.05
YME1L1Q96TA2 TRMT112P3-201ENST00000580149 358 ntBASIC15.34■□□□□ 0.05
YME1L1Q96TA2 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 AC006548.2-201ENST00000605217 529 ntBASIC15.34■□□□□ 0.05
YME1L1Q96TA2 AC008972.2-201ENST00000606587 494 ntBASIC15.34■□□□□ 0.05
YME1L1Q96TA2 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.34■□□□□ 0.05
YME1L1Q96TA2 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
YME1L1Q96TA2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
YME1L1Q96TA2 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
YME1L1Q96TA2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
YME1L1Q96TA2 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
YME1L1Q96TA2 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.33■□□□□ 0.05
YME1L1Q96TA2 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 MIR1301-201ENST00000408518 82 ntBASIC15.33■□□□□ 0.04
YME1L1Q96TA2 BX679664.3-201ENST00000414070 555 ntBASIC15.33■□□□□ 0.04
YME1L1Q96TA2 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 PPP1R2P4-201ENST00000424051 595 ntBASIC15.33■□□□□ 0.04
YME1L1Q96TA2 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 AC063952.3-201ENST00000467756 308 ntBASIC15.33■□□□□ 0.04
YME1L1Q96TA2 AC113935.1-201ENST00000471722 555 ntBASIC15.33■□□□□ 0.04
YME1L1Q96TA2 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 IGHV1-12-201ENST00000518307 205 ntBASIC15.33■□□□□ 0.04
YME1L1Q96TA2 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 SORD2P-201ENST00000558556 1069 ntBASIC15.33■□□□□ 0.04
YME1L1Q96TA2 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC15.33■□□□□ 0.04
YME1L1Q96TA2 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YME1L1Q96TA2 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YME1L1Q96TA2 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.32■□□□□ 0.04
YME1L1Q96TA2 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
YME1L1Q96TA2 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YME1L1Q96TA2 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.32■□□□□ 0.04
YME1L1Q96TA2 CCT8L1P-201ENST00000465400 1674 ntBASIC15.32■□□□□ 0.04
YME1L1Q96TA2 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
YME1L1Q96TA2 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.32■□□□□ 0.04
YME1L1Q96TA2 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.32■□□□□ 0.04
YME1L1Q96TA2 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.32■□□□□ 0.04
YME1L1Q96TA2 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YME1L1Q96TA2 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.32■□□□□ 0.04
YME1L1Q96TA2 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YME1L1Q96TA2 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
YME1L1Q96TA2 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms