Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC12.62□□□□□ -0.39
TMEM54Q969K7 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.62□□□□□ -0.39
TMEM54Q969K7 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.62□□□□□ -0.39
TMEM54Q969K7 AC091804.1-201ENST00000486888 567 ntBASIC12.62□□□□□ -0.39
TMEM54Q969K7 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.62□□□□□ -0.39
TMEM54Q969K7 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC12.62□□□□□ -0.39
TMEM54Q969K7 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC12.62□□□□□ -0.39
TMEM54Q969K7 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC12.62□□□□□ -0.39
TMEM54Q969K7 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.62□□□□□ -0.39
TMEM54Q969K7 AC093752.3-201ENST00000567343 901 ntBASIC12.62□□□□□ -0.39
TMEM54Q969K7 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.62□□□□□ -0.39
TMEM54Q969K7 AC138649.2-201ENST00000615886 705 ntBASIC12.62□□□□□ -0.39
TMEM54Q969K7 MIR6869-201ENST00000619434 62 ntBASIC12.62□□□□□ -0.39
TMEM54Q969K7 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
TMEM54Q969K7 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.62□□□□□ -0.39
TMEM54Q969K7 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
TMEM54Q969K7 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.62□□□□□ -0.39
TMEM54Q969K7 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM54Q969K7 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM54Q969K7 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM54Q969K7 SBF1P1-201ENST00000444527 5631 ntBASIC12.61□□□□□ -0.39
TMEM54Q969K7 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM54Q969K7 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM54Q969K7 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM54Q969K7 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.61□□□□□ -0.39
TMEM54Q969K7 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM54Q969K7 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM54Q969K7 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM54Q969K7 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM54Q969K7 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM54Q969K7 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM54Q969K7 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM54Q969K7 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM54Q969K7 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 EIF4HP1-201ENST00000453115 687 ntBASIC12.61□□□□□ -0.39
TMEM54Q969K7 RN7SL277P-201ENST00000481521 288 ntBASIC12.61□□□□□ -0.39
TMEM54Q969K7 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 GOLGA2P8-201ENST00000505201 779 ntBASIC12.61□□□□□ -0.39
TMEM54Q969K7 AC092658.1-201ENST00000505836 891 ntBASIC12.61□□□□□ -0.39
TMEM54Q969K7 AP001258.2-201ENST00000529891 490 ntBASIC12.61□□□□□ -0.39
TMEM54Q969K7 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 MIR4538-201ENST00000581377 78 ntBASIC12.61□□□□□ -0.39
TMEM54Q969K7 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 AL645939.5-201ENST00000606834 243 ntBASIC12.61□□□□□ -0.39
TMEM54Q969K7 AC026740.1-201ENST00000607068 791 ntBASIC12.61□□□□□ -0.39
TMEM54Q969K7 AL022334.2-201ENST00000610000 484 ntBASIC12.61□□□□□ -0.39
TMEM54Q969K7 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM54Q969K7 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM54Q969K7 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM54Q969K7 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM54Q969K7 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM54Q969K7 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM54Q969K7 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM54Q969K7 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM54Q969K7 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM54Q969K7 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.61□□□□□ -0.39
TMEM54Q969K7 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM54Q969K7 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms