Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HPS1Q92902 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
HPS1Q92902 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.36□□□□□ -0.27
HPS1Q92902 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HPS1Q92902 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HPS1Q92902 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HPS1Q92902 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HPS1Q92902 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
HPS1Q92902 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.36□□□□□ -0.27
HPS1Q92902 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.36□□□□□ -0.27
HPS1Q92902 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HPS1Q92902 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.36□□□□□ -0.27
HPS1Q92902 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HPS1Q92902 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
HPS1Q92902 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.36□□□□□ -0.27
HPS1Q92902 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HPS1Q92902 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
HPS1Q92902 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HPS1Q92902 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
HPS1Q92902 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
HPS1Q92902 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.36□□□□□ -0.27
HPS1Q92902 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
HPS1Q92902 U91328.1-201ENST00000437528 223 ntBASIC13.36□□□□□ -0.27
HPS1Q92902 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
HPS1Q92902 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.36□□□□□ -0.27
HPS1Q92902 AC092905.1-201ENST00000467527 949 ntBASIC13.36□□□□□ -0.27
HPS1Q92902 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HPS1Q92902 KATNBL1P4-201ENST00000503545 918 ntBASIC13.36□□□□□ -0.27
HPS1Q92902 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.36□□□□□ -0.27
HPS1Q92902 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.36□□□□□ -0.27
HPS1Q92902 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.36□□□□□ -0.27
HPS1Q92902 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.36□□□□□ -0.27
HPS1Q92902 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.36□□□□□ -0.27
HPS1Q92902 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.36□□□□□ -0.27
HPS1Q92902 HNRNPUP1-201ENST00000554987 333 ntBASIC13.36□□□□□ -0.27
HPS1Q92902 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.36□□□□□ -0.27
HPS1Q92902 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.36□□□□□ -0.27
HPS1Q92902 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.36□□□□□ -0.27
HPS1Q92902 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HPS1Q92902 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
HPS1Q92902 CHCHD2P3-201ENST00000603038 451 ntBASIC13.36□□□□□ -0.27
HPS1Q92902 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.36□□□□□ -0.27
HPS1Q92902 AC093726.1-201ENST00000608064 963 ntBASIC13.36□□□□□ -0.27
HPS1Q92902 AL162274.1-201ENST00000617191 1098 ntBASIC13.36□□□□□ -0.27
HPS1Q92902 AL109936.8-201ENST00000641772 604 ntBASIC13.36□□□□□ -0.27
HPS1Q92902 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HPS1Q92902 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HPS1Q92902 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
HPS1Q92902 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HPS1Q92902 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HPS1Q92902 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HPS1Q92902 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.36□□□□□ -0.27
HPS1Q92902 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HPS1Q92902 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HPS1Q92902 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HPS1Q92902 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
HPS1Q92902 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HPS1Q92902 AC102953.2-201ENST00000609755 3026 ntBASIC13.36□□□□□ -0.27
HPS1Q92902 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.36□□□□□ -0.27
HPS1Q92902 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HPS1Q92902 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HPS1Q92902 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HPS1Q92902 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HPS1Q92902 AL445209.1-201ENST00000607269 3491 ntBASIC13.36□□□□□ -0.27
HPS1Q92902 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
HPS1Q92902 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.36□□□□□ -0.27
HPS1Q92902 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HPS1Q92902 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HPS1Q92902 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.35□□□□□ -0.27
HPS1Q92902 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
HPS1Q92902 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HPS1Q92902 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC13.35□□□□□ -0.27
HPS1Q92902 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.35□□□□□ -0.27
HPS1Q92902 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
HPS1Q92902 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
HPS1Q92902 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HPS1Q92902 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HPS1Q92902 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HPS1Q92902 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HPS1Q92902 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
HPS1Q92902 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HPS1Q92902 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HPS1Q92902 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HPS1Q92902 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
HPS1Q92902 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.35□□□□□ -0.27
HPS1Q92902 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
HPS1Q92902 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.35□□□□□ -0.27
HPS1Q92902 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
HPS1Q92902 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.35□□□□□ -0.27
HPS1Q92902 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HPS1Q92902 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HPS1Q92902 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
HPS1Q92902 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HPS1Q92902 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HPS1Q92902 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.35□□□□□ -0.27
HPS1Q92902 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.35□□□□□ -0.27
HPS1Q92902 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
HPS1Q92902 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
HPS1Q92902 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HPS1Q92902 AL390039.1-201ENST00000399148 611 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms