Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 AC116347.1-201ENST00000442824 720 ntBASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 AC007622.1-201ENST00000488371 535 ntBASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 MIR4459-201ENST00000581837 66 ntBASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 AC009779.7-201ENST00000609031 469 ntBASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 SNORA30.1-201ENST00000363193 129 ntBASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 AC004771.1-201ENST00000438266 583 ntTSL 2 BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 AC092865.2-201ENST00000439409 971 ntBASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 IGHVII-74-1-201ENST00000517572 241 ntBASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 FES-204ENST00000414248 2327 ntTSL 2 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 SNORA47-201ENST00000458862 138 ntBASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 AC099552.4-201ENST00000624248 949 ntBASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 CD9-212ENST00000610354 1315 ntTSL 5 BASIC9.26□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms