Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 FO681548.1-201ENST00000455617 1132 ntBASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 ELK1P1-201ENST00000485699 580 ntBASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 CU634019.7-201ENST00000624153 1185 ntBASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 FP236241.2-201ENST00000624906 1185 ntBASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 GCOM2-201ENST00000509133 1104 ntBASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 API5-211ENST00000534695 560 ntTSL 5 BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 BEND3P3-201ENST00000611030 2440 ntBASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
DNAAF1Q8NEP3 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms