Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 AC022217.1-201ENST00000521069 738 ntBASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 AC003686.1-201ENST00000550956 1034 ntBASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 AC005730.2-201ENST00000564549 1184 ntBASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 AC005695.3-201ENST00000614522 232 ntBASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 AC004923.1-202ENST00000642106 209 ntBASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 MBLAC2-202ENST00000514906 1936 ntBASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 HLA-J-204ENST00000495278 958 ntBASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 AC126915.1-201ENST00000522847 1038 ntBASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 PGAM1P5-201ENST00000548011 764 ntBASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 LINC01230-201ENST00000625222 3017 ntBASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRFBP1Q8NEF9 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 CYP4F23P-201ENST00000593402 1579 ntBASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms