Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 F10-203ENST00000409306 1450 ntTSL 3 BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 HDGF-202ENST00000368206 960 ntTSL 5 BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 U73169.1-201ENST00000395152 367 ntBASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 AC000077.1-201ENST00000420012 953 ntBASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 RPSAP70-201ENST00000504462 864 ntBASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 AC079331.1-201ENST00000623200 1200 ntBASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 IGHVIII-5-2-201ENST00000522505 261 ntBASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 AC139100.2-201ENST00000616901 662 ntBASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 AC026471.1-201ENST00000564629 3026 ntBASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 POLL-206ENST00000370172 2308 ntTSL 2 BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 ASS1P1-201ENST00000402854 1237 ntBASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 BX679664.3-201ENST00000414070 555 ntBASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 RN7SL351P-201ENST00000469306 248 ntBASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 AC113935.1-201ENST00000471722 555 ntBASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 AC140658.4-201ENST00000561990 352 ntBASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 RN7SL605P-201ENST00000577229 281 ntBASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 RN7SL556P-201ENST00000582856 298 ntBASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 AL591424.3-201ENST00000614278 872 ntBASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 PDXDC2P-206ENST00000534700 1315 ntBASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms