Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 USP17L6P-201ENST00000382470 1197 ntBASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 ST13P19-201ENST00000442505 1124 ntBASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 RNA5SP412-201ENST00000516234 123 ntBASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 MIR4741-201ENST00000579822 90 ntBASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 MIR4783-201ENST00000580343 82 ntBASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 AC021016.3-201ENST00000608367 477 ntBASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 MIR6805-201ENST00000615055 62 ntBASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 AL022313.4-201ENST00000562756 2046 ntBASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 CICP16-201ENST00000502609 2813 ntBASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 AC119751.2-201ENST00000504529 210 ntBASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 ACR-203ENST00000529621 708 ntTSL 5 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 AC010328.2-201ENST00000597698 1111 ntBASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 Z98259.2-201ENST00000641583 609 ntBASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms