Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 NDUFB10P1-201ENST00000567319 521 ntBASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 RN7SL455P-201ENST00000580629 282 ntBASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 MST1P2-201ENST00000457982 2291 ntBASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 AC091046.1-201ENST00000331871 207 ntBASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 BX679664.3-201ENST00000414070 555 ntBASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 RPL8P2-201ENST00000430538 502 ntBASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 AP000358.1-201ENST00000456260 156 ntBASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 AC113935.1-201ENST00000471722 555 ntBASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 AC005740.1-201ENST00000515639 522 ntBASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 ALG1L13P-202ENST00000519320 584 ntBASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 AC015656.1-201ENST00000624209 3578 ntBASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
ARHGEF39Q8N4T4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms