Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 AL354877.1-201ENST00000424412 413 ntBASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 KRT18P8-201ENST00000581937 1246 ntBASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 AC005962.1-201ENST00000584100 773 ntBASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 AC133540.1-201ENST00000620845 1019 ntBASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 AC015909.5-201ENST00000624336 2266 ntBASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 ANKRD19P-201ENST00000338192 862 ntBASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 AK2P2-201ENST00000439142 405 ntBASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 YBX1P6-201ENST00000442962 1002 ntBASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 AC006122.1-201ENST00000493323 440 ntBASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 AC022217.1-201ENST00000521069 738 ntBASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 MIR4741-201ENST00000579822 90 ntBASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 AC090386.2-201ENST00000623010 1039 ntBASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 FAM90A12P-201ENST00000519497 2375 ntBASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 FAM90A24P-201ENST00000520792 2369 ntBASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 AC072061.1-201ENST00000569710 2234 ntBASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 C8orf49-201ENST00000525043 1968 ntBASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms