Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 RPL13P2-201ENST00000440687 659 ntBASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 AC007551.1-201ENST00000457394 519 ntBASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 AL049840.4-201ENST00000602422 811 ntBASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 MIR6869-201ENST00000619434 62 ntBASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 AC068587.10-201ENST00000641210 219 ntBASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 AC090643.2-201ENST00000623442 2029 ntBASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 AL645937.6-201ENST00000641122 3727 ntBASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 NME1-209ENST00000511355 1645 ntTSL 5 BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 VDAC1P7-201ENST00000462417 847 ntBASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 RPL13AP25-201ENST00000484130 612 ntBASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 BRI3BPP1-201ENST00000594224 787 ntBASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 AC010328.2-201ENST00000597698 1111 ntBASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 AC243960.2-201ENST00000600996 747 ntBASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 AC244093.1-201ENST00000610837 814 ntBASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 AC102953.2-201ENST00000609755 3026 ntBASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 AP003969.2-201ENST00000623739 2275 ntBASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
FOXR1Q6PIV2 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
FOXR1Q6PIV2 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
FOXR1Q6PIV2 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
FOXR1Q6PIV2 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
FOXR1Q6PIV2 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC15.08■□□□□ 0.01
FOXR1Q6PIV2 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
FOXR1Q6PIV2 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
FOXR1Q6PIV2 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
FOXR1Q6PIV2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.08■□□□□ 0.01
FOXR1Q6PIV2 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
FOXR1Q6PIV2 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
FOXR1Q6PIV2 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
FOXR1Q6PIV2 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms