Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
AP1S2P56377 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.02□□□□□ -0.17
AP1S2P56377 AC007663.3-201ENST00000609632 465 ntBASIC14.02□□□□□ -0.17
AP1S2P56377 AL136295.7-201ENST00000619226 1200 ntBASIC14.02□□□□□ -0.17
AP1S2P56377 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.02□□□□□ -0.17
AP1S2P56377 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.02□□□□□ -0.17
AP1S2P56377 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
AP1S2P56377 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
AP1S2P56377 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.02□□□□□ -0.17
AP1S2P56377 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP1S2P56377 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.02□□□□□ -0.17
AP1S2P56377 AL157996.1-201ENST00000624684 2299 ntBASIC14.02□□□□□ -0.17
AP1S2P56377 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP1S2P56377 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.02□□□□□ -0.17
AP1S2P56377 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
AP1S2P56377 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S2P56377 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S2P56377 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S2P56377 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S2P56377 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S2P56377 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S2P56377 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.01□□□□□ -0.17
AP1S2P56377 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
AP1S2P56377 AC007952.5-201ENST00000572818 1486 ntBASIC14.01□□□□□ -0.17
AP1S2P56377 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S2P56377 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S2P56377 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S2P56377 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.01□□□□□ -0.17
AP1S2P56377 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S2P56377 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S2P56377 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.01□□□□□ -0.17
AP1S2P56377 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
AP1S2P56377 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.01□□□□□ -0.17
AP1S2P56377 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.01□□□□□ -0.17
AP1S2P56377 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S2P56377 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.01□□□□□ -0.17
AP1S2P56377 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.01□□□□□ -0.17
AP1S2P56377 AC104982.3-201ENST00000581995 514 ntBASIC14.01□□□□□ -0.17
AP1S2P56377 RN7SL163P-201ENST00000583100 276 ntBASIC14.01□□□□□ -0.17
AP1S2P56377 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.01□□□□□ -0.17
AP1S2P56377 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.01□□□□□ -0.17
AP1S2P56377 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.01□□□□□ -0.17
AP1S2P56377 AC005695.3-201ENST00000614522 232 ntBASIC14.01□□□□□ -0.17
AP1S2P56377 AC022748.3-201ENST00000621828 275 ntBASIC14.01□□□□□ -0.17
AP1S2P56377 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.01□□□□□ -0.17
AP1S2P56377 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.01□□□□□ -0.17
AP1S2P56377 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S2P56377 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S2P56377 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S2P56377 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S2P56377 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S2P56377 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
AP1S2P56377 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S2P56377 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S2P56377 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.01□□□□□ -0.17
AP1S2P56377 AC018629.1-201ENST00000623381 1736 ntBASIC14.01□□□□□ -0.17
AP1S2P56377 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
AP1S2P56377 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S2P56377 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S2P56377 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
AP1S2P56377 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S2P56377 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.01□□□□□ -0.17
AP1S2P56377 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S2P56377 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S2P56377 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S2P56377 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14□□□□□ -0.17
AP1S2P56377 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S2P56377 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP1S2P56377 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14□□□□□ -0.17
AP1S2P56377 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
AP1S2P56377 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
AP1S2P56377 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP1S2P56377 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
AP1S2P56377 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S2P56377 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14□□□□□ -0.17
AP1S2P56377 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP1S2P56377 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
AP1S2P56377 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14□□□□□ -0.17
AP1S2P56377 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S2P56377 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP1S2P56377 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14□□□□□ -0.17
AP1S2P56377 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP1S2P56377 AC106794.1-201ENST00000506935 792 ntBASIC14□□□□□ -0.17
AP1S2P56377 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14□□□□□ -0.17
AP1S2P56377 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14□□□□□ -0.17
AP1S2P56377 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
AP1S2P56377 AL359881.2-201ENST00000602973 570 ntBASIC14□□□□□ -0.17
AP1S2P56377 AC004923.1-202ENST00000642106 209 ntBASIC14□□□□□ -0.17
AP1S2P56377 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S2P56377 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S2P56377 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S2P56377 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP1S2P56377 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP1S2P56377 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
AP1S2P56377 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14□□□□□ -0.17
AP1S2P56377 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14□□□□□ -0.17
AP1S2P56377 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S2P56377 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S2P56377 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S2P56377 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms