Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LHX2P50458 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LHX2P50458 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LHX2P50458 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.78□□□□□ -0.36
LHX2P50458 RPL13AP3-202ENST00000494676 1473 ntBASIC12.78□□□□□ -0.36
LHX2P50458 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LHX2P50458 AC067931.2-201ENST00000623655 2003 ntBASIC12.78□□□□□ -0.36
LHX2P50458 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LHX2P50458 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.77□□□□□ -0.36
LHX2P50458 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
LHX2P50458 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
LHX2P50458 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LHX2P50458 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.36
LHX2P50458 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
LHX2P50458 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LHX2P50458 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
LHX2P50458 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.77□□□□□ -0.36
LHX2P50458 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.77□□□□□ -0.36
LHX2P50458 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
LHX2P50458 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.77□□□□□ -0.36
LHX2P50458 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
LHX2P50458 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LHX2P50458 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LHX2P50458 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LHX2P50458 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.77□□□□□ -0.37
LHX2P50458 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LHX2P50458 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
LHX2P50458 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LHX2P50458 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LHX2P50458 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
LHX2P50458 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LHX2P50458 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LHX2P50458 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LHX2P50458 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LHX2P50458 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.77□□□□□ -0.37
LHX2P50458 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LHX2P50458 AC092506.1-202ENST00000401022 528 ntBASIC12.77□□□□□ -0.37
LHX2P50458 AC006987.1-201ENST00000413610 527 ntBASIC12.77□□□□□ -0.37
LHX2P50458 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC12.77□□□□□ -0.37
LHX2P50458 HINT2P1-201ENST00000419438 481 ntBASIC12.77□□□□□ -0.37
LHX2P50458 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.77□□□□□ -0.37
LHX2P50458 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
LHX2P50458 FGFR3P1-201ENST00000449999 601 ntBASIC12.77□□□□□ -0.37
LHX2P50458 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC12.77□□□□□ -0.37
LHX2P50458 TMEM198B-204ENST00000484016 896 ntBASIC12.77□□□□□ -0.37
LHX2P50458 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC12.77□□□□□ -0.37
LHX2P50458 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.77□□□□□ -0.37
LHX2P50458 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC12.77□□□□□ -0.37
LHX2P50458 TPM1-223ENST00000560445 485 ntTSL 3 BASIC12.77□□□□□ -0.37
LHX2P50458 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC12.77□□□□□ -0.37
LHX2P50458 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.77□□□□□ -0.37
LHX2P50458 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC12.77□□□□□ -0.37
LHX2P50458 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
LHX2P50458 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.77□□□□□ -0.37
LHX2P50458 CMC2-224ENST00000630396 481 ntTSL 5 BASIC12.77□□□□□ -0.37
LHX2P50458 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LHX2P50458 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LHX2P50458 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
LHX2P50458 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
LHX2P50458 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
LHX2P50458 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.77□□□□□ -0.37
LHX2P50458 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
LHX2P50458 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
LHX2P50458 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.77□□□□□ -0.37
LHX2P50458 AC007191.1-201ENST00000623179 2995 ntBASIC12.77□□□□□ -0.37
LHX2P50458 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
LHX2P50458 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LHX2P50458 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LHX2P50458 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LHX2P50458 AL365209.1-201ENST00000624418 6473 ntBASIC12.77□□□□□ -0.37
LHX2P50458 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
LHX2P50458 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LHX2P50458 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LHX2P50458 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LHX2P50458 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LHX2P50458 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LHX2P50458 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.76□□□□□ -0.37
LHX2P50458 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LHX2P50458 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.76□□□□□ -0.37
LHX2P50458 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LHX2P50458 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LHX2P50458 AC152010.1-201ENST00000415779 2006 ntBASIC12.76□□□□□ -0.37
LHX2P50458 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
LHX2P50458 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LHX2P50458 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.76□□□□□ -0.37
LHX2P50458 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LHX2P50458 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LHX2P50458 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LHX2P50458 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC12.76□□□□□ -0.37
LHX2P50458 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LHX2P50458 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
LHX2P50458 MPV17-204ENST00000399052 749 ntTSL 4 BASIC12.76□□□□□ -0.37
LHX2P50458 GGCT-203ENST00000409144 836 ntTSL 2 BASIC12.76□□□□□ -0.37
LHX2P50458 BX679664.3-201ENST00000414070 555 ntBASIC12.76□□□□□ -0.37
LHX2P50458 HMGA1P1-201ENST00000415560 1062 ntBASIC12.76□□□□□ -0.37
LHX2P50458 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC12.76□□□□□ -0.37
LHX2P50458 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.76□□□□□ -0.37
LHX2P50458 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.76□□□□□ -0.37
LHX2P50458 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC12.76□□□□□ -0.37
LHX2P50458 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms