Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 AL807761.2-201ENST00000422849 729 ntBASIC14.31□□□□□ -0.12
CSNK1DP48730 AL592076.1-201ENST00000424448 303 ntBASIC14.31□□□□□ -0.12
CSNK1DP48730 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.31□□□□□ -0.12
CSNK1DP48730 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.31□□□□□ -0.12
CSNK1DP48730 FTH1P22-201ENST00000456305 520 ntBASIC14.31□□□□□ -0.12
CSNK1DP48730 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.31□□□□□ -0.12
CSNK1DP48730 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.31□□□□□ -0.12
CSNK1DP48730 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CSNK1DP48730 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.31□□□□□ -0.12
CSNK1DP48730 MIR3907-201ENST00000579424 151 ntBASIC14.31□□□□□ -0.12
CSNK1DP48730 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.31□□□□□ -0.12
CSNK1DP48730 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.31□□□□□ -0.12
CSNK1DP48730 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.31□□□□□ -0.12
CSNK1DP48730 AL021707.6-201ENST00000609212 491 ntBASIC14.31□□□□□ -0.12
CSNK1DP48730 OR2I1P-210ENST00000642037 4691 ntBASIC14.31□□□□□ -0.12
CSNK1DP48730 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.31□□□□□ -0.12
CSNK1DP48730 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.31□□□□□ -0.12
CSNK1DP48730 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CSNK1DP48730 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.31□□□□□ -0.12
CSNK1DP48730 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.31□□□□□ -0.12
CSNK1DP48730 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CSNK1DP48730 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1DP48730 AL139158.3-201ENST00000641212 1562 ntBASIC14.3□□□□□ -0.12
CSNK1DP48730 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1DP48730 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1DP48730 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CSNK1DP48730 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1DP48730 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1DP48730 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
CSNK1DP48730 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1DP48730 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CSNK1DP48730 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1DP48730 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.3□□□□□ -0.12
CSNK1DP48730 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.3□□□□□ -0.12
CSNK1DP48730 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.3□□□□□ -0.12
CSNK1DP48730 AK2P2-201ENST00000439142 405 ntBASIC14.3□□□□□ -0.12
CSNK1DP48730 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.3□□□□□ -0.12
CSNK1DP48730 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.3□□□□□ -0.12
CSNK1DP48730 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CSNK1DP48730 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.3□□□□□ -0.12
CSNK1DP48730 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.3□□□□□ -0.12
CSNK1DP48730 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.3□□□□□ -0.12
CSNK1DP48730 RN7SL665P-201ENST00000578793 300 ntBASIC14.3□□□□□ -0.12
CSNK1DP48730 AL133499.1-201ENST00000596207 608 ntBASIC14.3□□□□□ -0.12
CSNK1DP48730 AC007326.1-201ENST00000604539 458 ntBASIC14.3□□□□□ -0.12
CSNK1DP48730 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CSNK1DP48730 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
CSNK1DP48730 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.3□□□□□ -0.12
CSNK1DP48730 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CSNK1DP48730 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1DP48730 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1DP48730 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.3□□□□□ -0.12
CSNK1DP48730 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.3□□□□□ -0.12
CSNK1DP48730 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1DP48730 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CSNK1DP48730 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1DP48730 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CSNK1DP48730 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1DP48730 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CSNK1DP48730 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1DP48730 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1DP48730 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1DP48730 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CSNK1DP48730 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1DP48730 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.29□□□□□ -0.12
CSNK1DP48730 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1DP48730 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CSNK1DP48730 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
CSNK1DP48730 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1DP48730 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1DP48730 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1DP48730 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1DP48730 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1DP48730 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
CSNK1DP48730 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1DP48730 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CSNK1DP48730 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CSNK1DP48730 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSNK1DP48730 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CSNK1DP48730 AL627231.1-201ENST00000394467 1125 ntBASIC14.29□□□□□ -0.12
CSNK1DP48730 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.29□□□□□ -0.12
CSNK1DP48730 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.29□□□□□ -0.12
CSNK1DP48730 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.29□□□□□ -0.12
CSNK1DP48730 RPL8P2-201ENST00000430538 502 ntBASIC14.29□□□□□ -0.12
CSNK1DP48730 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.29□□□□□ -0.12
CSNK1DP48730 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms