Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 IGHEP2-201ENST00000519308 1256 ntBASIC17.48■□□□□ 0.39
PDE6BP35913 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC17.48■□□□□ 0.39
PDE6BP35913 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC17.48■□□□□ 0.39
PDE6BP35913 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC17.48■□□□□ 0.39
PDE6BP35913 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.48■□□□□ 0.39
PDE6BP35913 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC17.48■□□□□ 0.39
PDE6BP35913 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC17.48■□□□□ 0.39
PDE6BP35913 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PDE6BP35913 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC17.48■□□□□ 0.39
PDE6BP35913 RARS-210ENST00000626454 177 ntTSL 5 BASIC17.48■□□□□ 0.39
PDE6BP35913 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6BP35913 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PDE6BP35913 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6BP35913 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6BP35913 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.48■□□□□ 0.39
PDE6BP35913 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6BP35913 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6BP35913 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6BP35913 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
PDE6BP35913 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.48■□□□□ 0.39
PDE6BP35913 SHMT1P1-201ENST00000419974 1312 ntBASIC17.47■□□□□ 0.39
PDE6BP35913 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.47■□□□□ 0.39
PDE6BP35913 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC17.47■□□□□ 0.39
PDE6BP35913 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6BP35913 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.47■□□□□ 0.39
PDE6BP35913 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6BP35913 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.47■□□□□ 0.39
PDE6BP35913 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6BP35913 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6BP35913 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC17.47■□□□□ 0.39
PDE6BP35913 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6BP35913 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6BP35913 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.47■□□□□ 0.39
PDE6BP35913 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6BP35913 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.47■□□□□ 0.39
PDE6BP35913 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6BP35913 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
PDE6BP35913 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC17.47■□□□□ 0.39
PDE6BP35913 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6BP35913 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PDE6BP35913 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PDE6BP35913 LINP1-201ENST00000417112 917 ntTSL 2 BASIC17.47■□□□□ 0.39
PDE6BP35913 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC17.47■□□□□ 0.39
PDE6BP35913 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PDE6BP35913 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC17.47■□□□□ 0.39
PDE6BP35913 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC17.47■□□□□ 0.39
PDE6BP35913 EMC4-208ENST00000559078 599 ntTSL 3 BASIC17.47■□□□□ 0.39
PDE6BP35913 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC17.47■□□□□ 0.39
PDE6BP35913 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC17.47■□□□□ 0.39
PDE6BP35913 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC17.47■□□□□ 0.39
PDE6BP35913 MIR6816-201ENST00000620368 66 ntBASIC17.47■□□□□ 0.39
PDE6BP35913 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC17.47■□□□□ 0.39
PDE6BP35913 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6BP35913 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6BP35913 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6BP35913 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6BP35913 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.47■□□□□ 0.39
PDE6BP35913 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.47■□□□□ 0.39
PDE6BP35913 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.47■□□□□ 0.39
PDE6BP35913 AC091951.1-201ENST00000512854 2465 ntBASIC17.47■□□□□ 0.39
PDE6BP35913 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6BP35913 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PDE6BP35913 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6BP35913 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6BP35913 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6BP35913 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.47■□□□□ 0.39
PDE6BP35913 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC17.47■□□□□ 0.39
PDE6BP35913 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6BP35913 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC17.46■□□□□ 0.39
PDE6BP35913 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6BP35913 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PDE6BP35913 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PDE6BP35913 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC17.46■□□□□ 0.39
PDE6BP35913 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6BP35913 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
PDE6BP35913 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6BP35913 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.46■□□□□ 0.39
PDE6BP35913 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6BP35913 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6BP35913 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6BP35913 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6BP35913 AC022080.1-201ENST00000366255 781 ntBASIC17.46■□□□□ 0.39
PDE6BP35913 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6BP35913 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6BP35913 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6BP35913 ACTBP14-201ENST00000411655 1089 ntBASIC17.46■□□□□ 0.39
PDE6BP35913 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC17.46■□□□□ 0.39
PDE6BP35913 AC104961.1-201ENST00000427605 771 ntBASIC17.46■□□□□ 0.39
PDE6BP35913 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC17.46■□□□□ 0.39
PDE6BP35913 HNRNPA1P2-207ENST00000432375 960 ntBASIC17.46■□□□□ 0.39
PDE6BP35913 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC17.46■□□□□ 0.39
PDE6BP35913 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC17.46■□□□□ 0.39
PDE6BP35913 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC17.46■□□□□ 0.39
PDE6BP35913 BCRP4-201ENST00000506079 804 ntBASIC17.46■□□□□ 0.39
PDE6BP35913 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC17.46■□□□□ 0.39
PDE6BP35913 MT3-202ENST00000561640 514 ntTSL 3 BASIC17.46■□□□□ 0.39
PDE6BP35913 HNRNPA1P16-201ENST00000575692 955 ntBASIC17.46■□□□□ 0.39
PDE6BP35913 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC17.46■□□□□ 0.39
PDE6BP35913 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC17.46■□□□□ 0.39
PDE6BP35913 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms