Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CHRNA3P32297 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CHRNA3P32297 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA3P32297 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA3P32297 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA3P32297 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA3P32297 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA3P32297 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA3P32297 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA3P32297 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA3P32297 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA3P32297 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRNA3P32297 AC027612.1-201ENST00000445234 2395 ntBASIC15.21■□□□□ 0.03
CHRNA3P32297 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRNA3P32297 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CHRNA3P32297 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRNA3P32297 AC064801.2-201ENST00000625052 1303 ntBASIC15.21■□□□□ 0.03
CHRNA3P32297 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRNA3P32297 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRNA3P32297 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC15.21■□□□□ 0.03
CHRNA3P32297 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.21■□□□□ 0.03
CHRNA3P32297 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CHRNA3P32297 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRNA3P32297 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRNA3P32297 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHRNA3P32297 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRNA3P32297 AC020658.7-201ENST00000624274 2442 ntBASIC15.21■□□□□ 0.03
CHRNA3P32297 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRNA3P32297 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRNA3P32297 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRNA3P32297 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.21■□□□□ 0.03
CHRNA3P32297 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHRNA3P32297 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.21■□□□□ 0.03
CHRNA3P32297 BTBD6P1-201ENST00000412176 1267 ntBASIC15.21■□□□□ 0.03
CHRNA3P32297 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHRNA3P32297 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRNA3P32297 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRNA3P32297 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CHRNA3P32297 GOLGA2P4-201ENST00000441462 777 ntBASIC15.21■□□□□ 0.03
CHRNA3P32297 AC108725.1-201ENST00000495472 409 ntBASIC15.21■□□□□ 0.03
CHRNA3P32297 AP003171.2-201ENST00000528208 925 ntBASIC15.21■□□□□ 0.03
CHRNA3P32297 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CHRNA3P32297 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRNA3P32297 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.21■□□□□ 0.03
CHRNA3P32297 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.21■□□□□ 0.03
CHRNA3P32297 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.21■□□□□ 0.03
CHRNA3P32297 PPY2P-201ENST00000582808 702 ntBASIC15.21■□□□□ 0.03
CHRNA3P32297 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHRNA3P32297 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.21■□□□□ 0.03
CHRNA3P32297 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHRNA3P32297 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRNA3P32297 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHRNA3P32297 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CHRNA3P32297 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.21■□□□□ 0.03
CHRNA3P32297 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CHRNA3P32297 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRNA3P32297 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHRNA3P32297 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CHRNA3P32297 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHRNA3P32297 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHRNA3P32297 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHRNA3P32297 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHRNA3P32297 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.21■□□□□ 0.02
CHRNA3P32297 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHRNA3P32297 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHRNA3P32297 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRNA3P32297 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRNA3P32297 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRNA3P32297 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.2■□□□□ 0.02
CHRNA3P32297 FKBP4P6-201ENST00000457486 1332 ntBASIC15.2■□□□□ 0.02
CHRNA3P32297 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRNA3P32297 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRNA3P32297 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRNA3P32297 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRNA3P32297 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRNA3P32297 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.2■□□□□ 0.02
CHRNA3P32297 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.2■□□□□ 0.02
CHRNA3P32297 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRNA3P32297 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRNA3P32297 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRNA3P32297 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHRNA3P32297 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.2■□□□□ 0.02
CHRNA3P32297 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.2■□□□□ 0.02
CHRNA3P32297 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.2■□□□□ 0.02
CHRNA3P32297 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.2■□□□□ 0.02
CHRNA3P32297 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.2■□□□□ 0.02
CHRNA3P32297 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.2■□□□□ 0.02
CHRNA3P32297 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CHRNA3P32297 MIR4525-201ENST00000580000 75 ntBASIC15.2■□□□□ 0.02
CHRNA3P32297 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.2■□□□□ 0.02
CHRNA3P32297 AC073413.1-201ENST00000603927 732 ntBASIC15.2■□□□□ 0.02
CHRNA3P32297 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHRNA3P32297 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.2■□□□□ 0.02
CHRNA3P32297 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHRNA3P32297 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHRNA3P32297 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CHRNA3P32297 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC15.2■□□□□ 0.02
CHRNA3P32297 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHRNA3P32297 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CHRNA3P32297 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms