Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
XPAP23025 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
XPAP23025 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
XPAP23025 AC239868.1-201ENST00000369385 493 ntBASIC14.55□□□□□ -0.08
XPAP23025 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.55□□□□□ -0.08
XPAP23025 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
XPAP23025 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.55□□□□□ -0.08
XPAP23025 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.55□□□□□ -0.08
XPAP23025 TSPY25P-201ENST00000429463 745 ntBASIC14.55□□□□□ -0.08
XPAP23025 ST13P19-201ENST00000442505 1124 ntBASIC14.55□□□□□ -0.08
XPAP23025 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.55□□□□□ -0.08
XPAP23025 AC012618.1-201ENST00000461223 412 ntBASIC14.55□□□□□ -0.08
XPAP23025 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.55□□□□□ -0.08
XPAP23025 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
XPAP23025 AC003686.1-201ENST00000550956 1034 ntBASIC14.55□□□□□ -0.08
XPAP23025 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.55□□□□□ -0.08
XPAP23025 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.55□□□□□ -0.08
XPAP23025 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.55□□□□□ -0.08
XPAP23025 AC138627.1-207ENST00000641560 1006 ntBASIC14.55□□□□□ -0.08
XPAP23025 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.55□□□□□ -0.08
XPAP23025 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
XPAP23025 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.55□□□□□ -0.08
XPAP23025 AC008132.1-202ENST00000342005 1389 ntBASIC14.55□□□□□ -0.08
XPAP23025 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
XPAP23025 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.55□□□□□ -0.08
XPAP23025 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.55□□□□□ -0.08
XPAP23025 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
XPAP23025 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.55□□□□□ -0.08
XPAP23025 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
XPAP23025 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
XPAP23025 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
XPAP23025 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
XPAP23025 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.55□□□□□ -0.08
XPAP23025 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
XPAP23025 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.55□□□□□ -0.08
XPAP23025 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.54□□□□□ -0.08
XPAP23025 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
XPAP23025 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
XPAP23025 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.54□□□□□ -0.08
XPAP23025 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
XPAP23025 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.54□□□□□ -0.08
XPAP23025 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
XPAP23025 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
XPAP23025 AC140479.7-201ENST00000636301 2332 ntBASIC14.54□□□□□ -0.08
XPAP23025 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
XPAP23025 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
XPAP23025 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
XPAP23025 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
XPAP23025 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
XPAP23025 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
XPAP23025 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
XPAP23025 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
XPAP23025 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.54□□□□□ -0.08
XPAP23025 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
XPAP23025 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.54□□□□□ -0.08
XPAP23025 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
XPAP23025 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.54□□□□□ -0.08
XPAP23025 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
XPAP23025 ISCA2P1-201ENST00000425548 448 ntBASIC14.54□□□□□ -0.08
XPAP23025 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
XPAP23025 OR2R1P-201ENST00000441404 914 ntBASIC14.54□□□□□ -0.08
XPAP23025 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.54□□□□□ -0.08
XPAP23025 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.54□□□□□ -0.08
XPAP23025 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.54□□□□□ -0.08
XPAP23025 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.54□□□□□ -0.08
XPAP23025 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.54□□□□□ -0.08
XPAP23025 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
XPAP23025 AC024681.1-201ENST00000521917 487 ntBASIC14.54□□□□□ -0.08
XPAP23025 AL161670.2-201ENST00000557650 1227 ntBASIC14.54□□□□□ -0.08
XPAP23025 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.54□□□□□ -0.08
XPAP23025 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.54□□□□□ -0.08
XPAP23025 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.54□□□□□ -0.08
XPAP23025 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
XPAP23025 AL021578.1-201ENST00000613646 709 ntBASIC14.54□□□□□ -0.08
XPAP23025 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
XPAP23025 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
XPAP23025 FRMPD2B-201ENST00000431305 1347 ntBASIC14.54□□□□□ -0.08
XPAP23025 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.54□□□□□ -0.08
XPAP23025 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.54□□□□□ -0.08
XPAP23025 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.54□□□□□ -0.08
XPAP23025 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
XPAP23025 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.54□□□□□ -0.08
XPAP23025 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
XPAP23025 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.54□□□□□ -0.08
XPAP23025 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
XPAP23025 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
XPAP23025 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
XPAP23025 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
XPAP23025 AC232323.1-201ENST00000540724 2099 ntBASIC14.54□□□□□ -0.08
XPAP23025 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
XPAP23025 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.54□□□□□ -0.08
XPAP23025 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
XPAP23025 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
XPAP23025 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
XPAP23025 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
XPAP23025 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
XPAP23025 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
XPAP23025 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.53□□□□□ -0.08
XPAP23025 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.53□□□□□ -0.08
XPAP23025 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms