Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB3BP20337 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RAB3BP20337 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB3BP20337 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RAB3BP20337 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB3BP20337 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RAB3BP20337 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
RAB3BP20337 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
RAB3BP20337 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
RAB3BP20337 INTS4P2-202ENST00000614726 2019 ntBASIC12.67□□□□□ -0.38
RAB3BP20337 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB3BP20337 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB3BP20337 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB3BP20337 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB3BP20337 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
RAB3BP20337 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.67□□□□□ -0.38
RAB3BP20337 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RAB3BP20337 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB3BP20337 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB3BP20337 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB3BP20337 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB3BP20337 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RAB3BP20337 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB3BP20337 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB3BP20337 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB3BP20337 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB3BP20337 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB3BP20337 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB3BP20337 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB3BP20337 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RAB3BP20337 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB3BP20337 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.66□□□□□ -0.38
RAB3BP20337 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB3BP20337 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB3BP20337 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB3BP20337 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB3BP20337 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB3BP20337 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB3BP20337 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB3BP20337 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB3BP20337 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.66□□□□□ -0.38
RAB3BP20337 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RAB3BP20337 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RAB3BP20337 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RAB3BP20337 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.66□□□□□ -0.38
RAB3BP20337 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB3BP20337 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.66□□□□□ -0.38
RAB3BP20337 AC134915.1-201ENST00000426461 574 ntBASIC12.66□□□□□ -0.38
RAB3BP20337 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB3BP20337 AL161932.2-201ENST00000435436 679 ntBASIC12.66□□□□□ -0.38
RAB3BP20337 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.66□□□□□ -0.38
RAB3BP20337 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.66□□□□□ -0.38
RAB3BP20337 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.66□□□□□ -0.38
RAB3BP20337 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.66□□□□□ -0.38
RAB3BP20337 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.66□□□□□ -0.38
RAB3BP20337 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB3BP20337 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB3BP20337 BRI3BPP1-201ENST00000594224 787 ntBASIC12.66□□□□□ -0.38
RAB3BP20337 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.66□□□□□ -0.38
RAB3BP20337 AC104506.1-201ENST00000609247 429 ntBASIC12.66□□□□□ -0.38
RAB3BP20337 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.66□□□□□ -0.38
RAB3BP20337 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB3BP20337 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.66□□□□□ -0.38
RAB3BP20337 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB3BP20337 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB3BP20337 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB3BP20337 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB3BP20337 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB3BP20337 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.66□□□□□ -0.38
RAB3BP20337 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB3BP20337 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
RAB3BP20337 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB3BP20337 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB3BP20337 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB3BP20337 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB3BP20337 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB3BP20337 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB3BP20337 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB3BP20337 DNM1P41-201ENST00000623634 3350 ntBASIC12.66□□□□□ -0.38
RAB3BP20337 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.66□□□□□ -0.38
RAB3BP20337 AC106818.1-201ENST00000623223 3242 ntBASIC12.66□□□□□ -0.38
RAB3BP20337 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB3BP20337 AL445250.1-201ENST00000641671 2259 ntBASIC12.65□□□□□ -0.38
RAB3BP20337 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.65□□□□□ -0.38
RAB3BP20337 PTPRVP-205ENST00000641549 5067 ntBASIC12.65□□□□□ -0.38
RAB3BP20337 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB3BP20337 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB3BP20337 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB3BP20337 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB3BP20337 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB3BP20337 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.65□□□□□ -0.38
RAB3BP20337 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
RAB3BP20337 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB3BP20337 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB3BP20337 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB3BP20337 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB3BP20337 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB3BP20337 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.38
RAB3BP20337 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB3BP20337 AC100757.3-201ENST00000622361 1406 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms