Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ERCC2P18074 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ERCC2P18074 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ERCC2P18074 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
ERCC2P18074 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ERCC2P18074 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ERCC2P18074 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ERCC2P18074 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.78□□□□□ -0.04
ERCC2P18074 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ERCC2P18074 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ERCC2P18074 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.78□□□□□ -0.04
ERCC2P18074 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERCC2P18074 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.78□□□□□ -0.04
ERCC2P18074 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
ERCC2P18074 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
ERCC2P18074 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
ERCC2P18074 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERCC2P18074 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERCC2P18074 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERCC2P18074 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERCC2P18074 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
ERCC2P18074 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERCC2P18074 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.78□□□□□ -0.04
ERCC2P18074 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.78□□□□□ -0.04
ERCC2P18074 AC007274.1-201ENST00000439805 662 ntBASIC14.78□□□□□ -0.04
ERCC2P18074 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.78□□□□□ -0.04
ERCC2P18074 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.78□□□□□ -0.04
ERCC2P18074 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ERCC2P18074 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ERCC2P18074 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.78□□□□□ -0.04
ERCC2P18074 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.78□□□□□ -0.04
ERCC2P18074 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.78□□□□□ -0.04
ERCC2P18074 AL157813.1-201ENST00000612996 587 ntBASIC14.78□□□□□ -0.04
ERCC2P18074 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERCC2P18074 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ERCC2P18074 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERCC2P18074 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERCC2P18074 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ERCC2P18074 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERCC2P18074 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERCC2P18074 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ERCC2P18074 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERCC2P18074 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERCC2P18074 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERCC2P18074 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERCC2P18074 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ERCC2P18074 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERCC2P18074 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERCC2P18074 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERCC2P18074 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERCC2P18074 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.78□□□□□ -0.04
ERCC2P18074 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ERCC2P18074 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
ERCC2P18074 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.77□□□□□ -0.04
ERCC2P18074 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.77□□□□□ -0.04
ERCC2P18074 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ERCC2P18074 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ERCC2P18074 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
ERCC2P18074 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.77□□□□□ -0.04
ERCC2P18074 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ERCC2P18074 AC007952.5-201ENST00000572818 1486 ntBASIC14.77□□□□□ -0.04
ERCC2P18074 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ERCC2P18074 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ERCC2P18074 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
ERCC2P18074 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ERCC2P18074 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ERCC2P18074 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ERCC2P18074 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
ERCC2P18074 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ERCC2P18074 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ERCC2P18074 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
ERCC2P18074 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.77□□□□□ -0.04
ERCC2P18074 BEND3P1-201ENST00000421591 1944 ntBASIC14.77□□□□□ -0.04
ERCC2P18074 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.77□□□□□ -0.05
ERCC2P18074 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
ERCC2P18074 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ERCC2P18074 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.77□□□□□ -0.05
ERCC2P18074 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.77□□□□□ -0.05
ERCC2P18074 AC244107.1-201ENST00000442033 332 ntBASIC14.77□□□□□ -0.05
ERCC2P18074 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.77□□□□□ -0.05
ERCC2P18074 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ERCC2P18074 RCC2P8-201ENST00000502779 1035 ntBASIC14.77□□□□□ -0.05
ERCC2P18074 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.77□□□□□ -0.05
ERCC2P18074 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.77□□□□□ -0.05
ERCC2P18074 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.77□□□□□ -0.05
ERCC2P18074 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ERCC2P18074 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.77□□□□□ -0.05
ERCC2P18074 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.77□□□□□ -0.05
ERCC2P18074 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.77□□□□□ -0.05
ERCC2P18074 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ERCC2P18074 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.77□□□□□ -0.05
ERCC2P18074 AGAP10P-201ENST00000454844 2418 ntBASIC14.77□□□□□ -0.05
ERCC2P18074 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ERCC2P18074 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
ERCC2P18074 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
ERCC2P18074 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.77□□□□□ -0.05
ERCC2P18074 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
ERCC2P18074 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ERCC2P18074 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ERCC2P18074 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms