Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DOBP13765 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DOBP13765 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
HLA-DOBP13765 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DOBP13765 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.91□□□□□ -0.34
HLA-DOBP13765 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DOBP13765 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DOBP13765 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DOBP13765 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DOBP13765 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DOBP13765 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DOBP13765 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DOBP13765 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DOBP13765 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DOBP13765 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DOBP13765 MIR663B-201ENST00000408361 115 ntBASIC12.91□□□□□ -0.34
HLA-DOBP13765 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DOBP13765 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
HLA-DOBP13765 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DOBP13765 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
HLA-DOBP13765 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DOBP13765 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DOBP13765 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.91□□□□□ -0.34
HLA-DOBP13765 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DOBP13765 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.91□□□□□ -0.34
HLA-DOBP13765 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.91□□□□□ -0.34
HLA-DOBP13765 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC12.91□□□□□ -0.34
HLA-DOBP13765 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.91□□□□□ -0.34
HLA-DOBP13765 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.91□□□□□ -0.34
HLA-DOBP13765 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.91□□□□□ -0.34
HLA-DOBP13765 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DOBP13765 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.91□□□□□ -0.34
HLA-DOBP13765 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.91□□□□□ -0.34
HLA-DOBP13765 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.91□□□□□ -0.34
HLA-DOBP13765 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.91□□□□□ -0.34
HLA-DOBP13765 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
HLA-DOBP13765 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DOBP13765 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DOBP13765 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
HLA-DOBP13765 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DOBP13765 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DOBP13765 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DOBP13765 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.91□□□□□ -0.34
HLA-DOBP13765 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.91□□□□□ -0.34
HLA-DOBP13765 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.91□□□□□ -0.34
HLA-DOBP13765 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DOBP13765 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DOBP13765 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
HLA-DOBP13765 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DOBP13765 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DOBP13765 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
HLA-DOBP13765 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DOBP13765 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DOBP13765 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
HLA-DOBP13765 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.9□□□□□ -0.34
HLA-DOBP13765 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
HLA-DOBP13765 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DOBP13765 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
HLA-DOBP13765 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
HLA-DOBP13765 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DOBP13765 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DOBP13765 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DOBP13765 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC12.9□□□□□ -0.34
HLA-DOBP13765 RPL18P13-201ENST00000478088 569 ntBASIC12.9□□□□□ -0.34
HLA-DOBP13765 SCARNA21-201ENST00000517026 139 ntBASIC12.9□□□□□ -0.34
HLA-DOBP13765 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.9□□□□□ -0.34
HLA-DOBP13765 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.9□□□□□ -0.34
HLA-DOBP13765 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.9□□□□□ -0.34
HLA-DOBP13765 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.9□□□□□ -0.34
HLA-DOBP13765 AC003686.1-201ENST00000550956 1034 ntBASIC12.9□□□□□ -0.34
HLA-DOBP13765 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.9□□□□□ -0.34
HLA-DOBP13765 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.9□□□□□ -0.34
HLA-DOBP13765 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DOBP13765 AC124068.2-201ENST00000569473 1109 ntBASIC12.9□□□□□ -0.34
HLA-DOBP13765 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.9□□□□□ -0.34
HLA-DOBP13765 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.9□□□□□ -0.34
HLA-DOBP13765 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC12.9□□□□□ -0.34
HLA-DOBP13765 AC008805.1-201ENST00000590892 364 ntBASIC12.9□□□□□ -0.34
HLA-DOBP13765 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.9□□□□□ -0.34
HLA-DOBP13765 Six3os1_5.1-201ENST00000611000 271 ntBASIC12.9□□□□□ -0.34
HLA-DOBP13765 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DOBP13765 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DOBP13765 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DOBP13765 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
HLA-DOBP13765 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.9□□□□□ -0.34
HLA-DOBP13765 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.9□□□□□ -0.34
HLA-DOBP13765 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
HLA-DOBP13765 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DOBP13765 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
HLA-DOBP13765 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DOBP13765 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.9□□□□□ -0.34
HLA-DOBP13765 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.9□□□□□ -0.34
HLA-DOBP13765 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DOBP13765 LAP3P2-201ENST00000454686 1454 ntBASIC12.9□□□□□ -0.34
HLA-DOBP13765 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DOBP13765 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DOBP13765 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DOBP13765 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.9□□□□□ -0.35
HLA-DOBP13765 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
HLA-DOBP13765 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms