Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 RHOXF1P1-202ENST00000635473 501 ntBASIC10.65□□□□□ -0.7
NACAE9PAV3 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
NACAE9PAV3 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 TBC1D16-201ENST00000310924 10936 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 AC011474.4-201ENST00000623523 2076 ntBASIC10.65□□□□□ -0.7
NACAE9PAV3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC10.65□□□□□ -0.7
NACAE9PAV3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC10.65□□□□□ -0.7
NACAE9PAV3 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 REXO1L6P-201ENST00000603433 1515 ntBASIC10.65□□□□□ -0.7
NACAE9PAV3 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC10.65□□□□□ -0.7
NACAE9PAV3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
NACAE9PAV3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
NACAE9PAV3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
NACAE9PAV3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC10.65□□□□□ -0.7
NACAE9PAV3 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC10.65□□□□□ -0.7
NACAE9PAV3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC10.65□□□□□ -0.7
NACAE9PAV3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
NACAE9PAV3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC10.65□□□□□ -0.7
NACAE9PAV3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC10.65□□□□□ -0.7
NACAE9PAV3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC10.65□□□□□ -0.7
NACAE9PAV3 DUX4L45-201ENST00000566406 1057 ntBASIC10.65□□□□□ -0.7
NACAE9PAV3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
NACAE9PAV3 RN7SL560P-201ENST00000577943 264 ntBASIC10.65□□□□□ -0.7
NACAE9PAV3 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC10.65□□□□□ -0.7
NACAE9PAV3 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
NACAE9PAV3 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
NACAE9PAV3 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
NACAE9PAV3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
NACAE9PAV3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC10.65□□□□□ -0.71
NACAE9PAV3 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
NACAE9PAV3 FBN2-204ENST00000508053 11132 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
NACAE9PAV3 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
NACAE9PAV3 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC10.65□□□□□ -0.71
NACAE9PAV3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC10.64□□□□□ -0.71
NACAE9PAV3 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
NACAE9PAV3 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC10.64□□□□□ -0.71
NACAE9PAV3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC10.64□□□□□ -0.71
NACAE9PAV3 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
NACAE9PAV3 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
NACAE9PAV3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 AGGF1P1-201ENST00000509500 2073 ntBASIC10.64□□□□□ -0.71
NACAE9PAV3 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 TPO-206ENST00000382269 1155 ntTSL 5 BASIC10.64□□□□□ -0.71
NACAE9PAV3 BOLA2P3-201ENST00000404566 256 ntBASIC10.64□□□□□ -0.71
NACAE9PAV3 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC10.64□□□□□ -0.71
NACAE9PAV3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC10.64□□□□□ -0.71
NACAE9PAV3 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC10.64□□□□□ -0.71
NACAE9PAV3 ALG3P1-201ENST00000508806 1114 ntBASIC10.64□□□□□ -0.71
NACAE9PAV3 RIT1-205ENST00000539040 919 ntTSL 2 BASIC10.64□□□□□ -0.71
NACAE9PAV3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC10.64□□□□□ -0.71
NACAE9PAV3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC10.64□□□□□ -0.71
NACAE9PAV3 AL606495.2-201ENST00000605867 535 ntBASIC10.64□□□□□ -0.71
NACAE9PAV3 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC10.64□□□□□ -0.71
NACAE9PAV3 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC10.64□□□□□ -0.71
NACAE9PAV3 AC145423.3-201ENST00000615987 467 ntBASIC10.64□□□□□ -0.71
NACAE9PAV3 AP001002.3-201ENST00000623482 206 ntBASIC10.64□□□□□ -0.71
NACAE9PAV3 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC10.64□□□□□ -0.71
NACAE9PAV3 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
NACAE9PAV3 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC10.64□□□□□ -0.71
NACAE9PAV3 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
NACAE9PAV3 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC10.64□□□□□ -0.71
NACAE9PAV3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC10.64□□□□□ -0.71
NACAE9PAV3 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC10.64□□□□□ -0.71
NACAE9PAV3 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 ITM2B-202ENST00000378565 10137 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms