Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 AC239868.1-201ENST00000369385 493 ntBASIC10.27□□□□□ -0.77
LYRM9A8MSI8 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 CALR4P-201ENST00000431943 946 ntBASIC10.27□□□□□ -0.77
LYRM9A8MSI8 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 RN7SL530P-201ENST00000485097 298 ntBASIC10.27□□□□□ -0.77
LYRM9A8MSI8 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 POU5F1P2-201ENST00000521750 823 ntBASIC10.27□□□□□ -0.77
LYRM9A8MSI8 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 MIR6787-201ENST00000616675 61 ntBASIC10.27□□□□□ -0.77
LYRM9A8MSI8 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 CCT8L1P-201ENST00000465400 1674 ntBASIC10.27□□□□□ -0.77
LYRM9A8MSI8 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 TUBBP5-203ENST00000508529 1334 ntBASIC10.27□□□□□ -0.77
LYRM9A8MSI8 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
LYRM9A8MSI8 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 JTB-202ENST00000356648 1040 ntTSL 2 BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 FNTAP2-201ENST00000430308 634 ntBASIC10.26□□□□□ -0.77
LYRM9A8MSI8 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 AC006335.1-201ENST00000445200 547 ntBASIC10.26□□□□□ -0.77
LYRM9A8MSI8 KRT18P15-201ENST00000458108 1291 ntBASIC10.26□□□□□ -0.77
LYRM9A8MSI8 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC10.26□□□□□ -0.77
LYRM9A8MSI8 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms