Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 AC004466.1-201ENST00000599515 1080 ntBASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 AL096828.3-201ENST00000615354 462 ntBASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 AC132938.4-201ENST00000623835 848 ntBASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 AC006453.4-201ENST00000636949 1252 ntBASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 AC020910.6-201ENST00000623084 1459 ntBASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 HOMER2P2-201ENST00000451621 847 ntBASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 Z93015.1-201ENST00000451718 390 ntBASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 AL591846.1-201ENST00000451736 433 ntBASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 AP003171.2-201ENST00000528208 925 ntBASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 TCAM1P-207ENST00000485295 1537 ntBASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DDX49Q9Y6V7 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
DDX49Q9Y6V7 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
DDX49Q9Y6V7 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC17.39■□□□□ 0.38
DDX49Q9Y6V7 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
DDX49Q9Y6V7 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
DDX49Q9Y6V7 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DDX49Q9Y6V7 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.39■□□□□ 0.37
DDX49Q9Y6V7 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX49Q9Y6V7 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC17.39■□□□□ 0.37
DDX49Q9Y6V7 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
DDX49Q9Y6V7 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DDX49Q9Y6V7 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC17.39■□□□□ 0.37
DDX49Q9Y6V7 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DDX49Q9Y6V7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX49Q9Y6V7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.39■□□□□ 0.37
DDX49Q9Y6V7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
DDX49Q9Y6V7 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
DDX49Q9Y6V7 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX49Q9Y6V7 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
DDX49Q9Y6V7 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.39■□□□□ 0.37
DDX49Q9Y6V7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX49Q9Y6V7 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX49Q9Y6V7 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.39■□□□□ 0.37
DDX49Q9Y6V7 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DDX49Q9Y6V7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.39■□□□□ 0.37
DDX49Q9Y6V7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX49Q9Y6V7 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.39■□□□□ 0.37
DDX49Q9Y6V7 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms