Protein–RNA interactions for Protein: Q9Y2T2

AP3M1, AP-3 complex subunit mu-1, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3M1Q9Y2T2 FP236241.2-201ENST00000624906 1185 ntBASIC13.64□□□□□ -0.23
AP3M1Q9Y2T2 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.64□□□□□ -0.23
AP3M1Q9Y2T2 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
AP3M1Q9Y2T2 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3M1Q9Y2T2 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3M1Q9Y2T2 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP3M1Q9Y2T2 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP3M1Q9Y2T2 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3M1Q9Y2T2 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3M1Q9Y2T2 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3M1Q9Y2T2 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3M1Q9Y2T2 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.64□□□□□ -0.23
AP3M1Q9Y2T2 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
AP3M1Q9Y2T2 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
AP3M1Q9Y2T2 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
AP3M1Q9Y2T2 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3M1Q9Y2T2 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3M1Q9Y2T2 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.64□□□□□ -0.23
AP3M1Q9Y2T2 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
AP3M1Q9Y2T2 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
AP3M1Q9Y2T2 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP3M1Q9Y2T2 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
AP3M1Q9Y2T2 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
AP3M1Q9Y2T2 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP3M1Q9Y2T2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3M1Q9Y2T2 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3M1Q9Y2T2 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.64□□□□□ -0.23
AP3M1Q9Y2T2 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 TPM3P8-201ENST00000330554 643 ntBASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 AC145423.3-201ENST00000615987 467 ntBASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3M1Q9Y2T2 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AP3M1Q9Y2T2 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP3M1Q9Y2T2 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.62□□□□□ -0.23
AP3M1Q9Y2T2 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.62□□□□□ -0.23
AP3M1Q9Y2T2 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AP3M1Q9Y2T2 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.62□□□□□ -0.23
AP3M1Q9Y2T2 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AP3M1Q9Y2T2 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.62□□□□□ -0.23
AP3M1Q9Y2T2 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.62□□□□□ -0.23
AP3M1Q9Y2T2 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.62□□□□□ -0.23
AP3M1Q9Y2T2 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP3M1Q9Y2T2 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP3M1Q9Y2T2 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.62□□□□□ -0.23
AP3M1Q9Y2T2 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC13.62□□□□□ -0.23
AP3M1Q9Y2T2 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
AP3M1Q9Y2T2 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AP3M1Q9Y2T2 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
AP3M1Q9Y2T2 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
AP3M1Q9Y2T2 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.62□□□□□ -0.23
AP3M1Q9Y2T2 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.62□□□□□ -0.23
AP3M1Q9Y2T2 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
AP3M1Q9Y2T2 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AP3M1Q9Y2T2 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AP3M1Q9Y2T2 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms