Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 EIF3FP3-201ENST00000434851 1086 ntBASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 VDAC1P7-201ENST00000462417 847 ntBASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 MEIS3P1-201ENST00000495167 958 ntBASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 YBX1P5-201ENST00000509441 847 ntBASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 AC092865.5-201ENST00000545435 363 ntBASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 AL512356.2-201ENST00000546955 174 ntBASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 VPS18-202ENST00000558474 873 ntTSL 3 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 AC005829.1-201ENST00000570002 483 ntBASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 TEX48-202ENST00000612244 662 ntTSL 3 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 RHPN1-AS1-201ENST00000518049 1918 ntBASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 AL031719.1-201ENST00000623365 2587 ntBASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 AL355102.3-201ENST00000554299 1678 ntBASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 DDC-214ENST00000622873 1839 ntTSL 3 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 AL590440.2-201ENST00000641973 1595 ntBASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 RPS15-201ENST00000233609 534 ntTSL 2 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 USP17L6P-201ENST00000382470 1197 ntBASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 FAM86LP-201ENST00000478302 853 ntBASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 RAB35-202ENST00000534951 939 ntTSL 2 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 MIR4469-201ENST00000583919 79 ntBASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 RPS15-205ENST00000586686 562 ntTSL 5 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 RPS15-208ENST00000591804 711 ntTSL 5 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 AC093813.1-201ENST00000605066 256 ntBASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 AL844908.2-201ENST00000609461 460 ntBASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 AL662799.1-202ENST00000614205 422 ntBASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms