Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 AL049840.2-201ENST00000602722 535 ntBASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 AC002044.2-201ENST00000624910 970 ntBASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 ST5-261ENST00000626808 1071 ntTSL 5 BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 AL139424.3-202ENST00000641619 917 ntBASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 GOLGA8UP-201ENST00000527159 1755 ntBASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 RPL3P2-204ENST00000413027 1203 ntBASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 OR52M2P-201ENST00000414298 959 ntBASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 AC012362.1-201ENST00000434906 739 ntBASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 CD81-209ENST00000492627 886 ntTSL 3 BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 RNA5SP406-201ENST00000516106 112 ntBASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 AC226150.1-201ENST00000544259 466 ntBASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 AC016397.2-201ENST00000624848 1985 ntBASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPO2Q9UMS6 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 AC090643.2-201ENST00000623442 2029 ntBASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 PHB-210ENST00000511832 1509 ntTSL 2 BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 AC025183.3-201ENST00000623526 1482 ntBASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 AC004837.1-201ENST00000446267 564 ntBASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 GNG10P1-201ENST00000452289 199 ntBASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 HELLS-212ENST00000630929 400 ntTSL 5 BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms