Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ATP2A3Q93084 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.24■□□□□ 0.03
ATP2A3Q93084 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ATP2A3Q93084 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ATP2A3Q93084 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ATP2A3Q93084 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ATP2A3Q93084 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ATP2A3Q93084 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATP2A3Q93084 C8orf49-201ENST00000525043 1968 ntBASIC15.24■□□□□ 0.03
ATP2A3Q93084 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATP2A3Q93084 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATP2A3Q93084 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATP2A3Q93084 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATP2A3Q93084 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.24■□□□□ 0.03
ATP2A3Q93084 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
ATP2A3Q93084 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATP2A3Q93084 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ATP2A3Q93084 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ATP2A3Q93084 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATP2A3Q93084 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.24■□□□□ 0.03
ATP2A3Q93084 AL596276.2-201ENST00000447525 331 ntBASIC15.24■□□□□ 0.03
ATP2A3Q93084 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.24■□□□□ 0.03
ATP2A3Q93084 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.24■□□□□ 0.03
ATP2A3Q93084 TMEM198B-204ENST00000484016 896 ntBASIC15.24■□□□□ 0.03
ATP2A3Q93084 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.24■□□□□ 0.03
ATP2A3Q93084 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.24■□□□□ 0.03
ATP2A3Q93084 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.24■□□□□ 0.03
ATP2A3Q93084 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.24■□□□□ 0.03
ATP2A3Q93084 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.24■□□□□ 0.03
ATP2A3Q93084 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ATP2A3Q93084 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.24■□□□□ 0.03
ATP2A3Q93084 AC005962.1-201ENST00000584100 773 ntBASIC15.24■□□□□ 0.03
ATP2A3Q93084 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.24■□□□□ 0.03
ATP2A3Q93084 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC15.24■□□□□ 0.03
ATP2A3Q93084 AC079336.7-201ENST00000623428 1078 ntBASIC15.24■□□□□ 0.03
ATP2A3Q93084 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.24■□□□□ 0.03
ATP2A3Q93084 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.24■□□□□ 0.03
ATP2A3Q93084 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.24■□□□□ 0.03
ATP2A3Q93084 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ATP2A3Q93084 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ATP2A3Q93084 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATP2A3Q93084 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.24■□□□□ 0.03
ATP2A3Q93084 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ATP2A3Q93084 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATP2A3Q93084 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATP2A3Q93084 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
ATP2A3Q93084 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.24■□□□□ 0.03
ATP2A3Q93084 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATP2A3Q93084 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATP2A3Q93084 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
ATP2A3Q93084 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATP2A3Q93084 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATP2A3Q93084 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATP2A3Q93084 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ATP2A3Q93084 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATP2A3Q93084 AP001267.2-201ENST00000532619 2086 ntBASIC15.23■□□□□ 0.03
ATP2A3Q93084 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATP2A3Q93084 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATP2A3Q93084 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.23■□□□□ 0.03
ATP2A3Q93084 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ATP2A3Q93084 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATP2A3Q93084 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATP2A3Q93084 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ATP2A3Q93084 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATP2A3Q93084 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.23■□□□□ 0.03
ATP2A3Q93084 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.23■□□□□ 0.03
ATP2A3Q93084 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATP2A3Q93084 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.23■□□□□ 0.03
ATP2A3Q93084 ISCA2P1-201ENST00000425548 448 ntBASIC15.23■□□□□ 0.03
ATP2A3Q93084 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.23■□□□□ 0.03
ATP2A3Q93084 CICP12-201ENST00000455801 843 ntBASIC15.23■□□□□ 0.03
ATP2A3Q93084 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.23■□□□□ 0.03
ATP2A3Q93084 SCARNA21-201ENST00000517026 139 ntBASIC15.23■□□□□ 0.03
ATP2A3Q93084 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.23■□□□□ 0.03
ATP2A3Q93084 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
ATP2A3Q93084 AC131206.1-201ENST00000538078 1211 ntBASIC15.23■□□□□ 0.03
ATP2A3Q93084 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.23■□□□□ 0.03
ATP2A3Q93084 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.23■□□□□ 0.03
ATP2A3Q93084 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATP2A3Q93084 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
ATP2A3Q93084 AL353770.1-201ENST00000614915 403 ntBASIC15.23■□□□□ 0.03
ATP2A3Q93084 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATP2A3Q93084 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATP2A3Q93084 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATP2A3Q93084 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATP2A3Q93084 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
ATP2A3Q93084 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ATP2A3Q93084 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ATP2A3Q93084 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATP2A3Q93084 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ATP2A3Q93084 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATP2A3Q93084 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
ATP2A3Q93084 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.23■□□□□ 0.03
ATP2A3Q93084 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATP2A3Q93084 FAM90A7P-201ENST00000382628 1395 ntBASIC15.23■□□□□ 0.03
ATP2A3Q93084 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATP2A3Q93084 FAM90A23P-201ENST00000400136 1395 ntBASIC15.23■□□□□ 0.03
ATP2A3Q93084 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATP2A3Q93084 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATP2A3Q93084 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms