Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAPH1Q70E73 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.56□□□□□ -0.08
RAPH1Q70E73 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.56□□□□□ -0.08
RAPH1Q70E73 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAPH1Q70E73 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAPH1Q70E73 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAPH1Q70E73 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.56□□□□□ -0.08
RAPH1Q70E73 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.56□□□□□ -0.08
RAPH1Q70E73 AL590440.2-201ENST00000641973 1595 ntBASIC14.56□□□□□ -0.08
RAPH1Q70E73 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RAPH1Q70E73 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAPH1Q70E73 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAPH1Q70E73 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAPH1Q70E73 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.56□□□□□ -0.08
RAPH1Q70E73 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.56□□□□□ -0.08
RAPH1Q70E73 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAPH1Q70E73 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAPH1Q70E73 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
RAPH1Q70E73 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
RAPH1Q70E73 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAPH1Q70E73 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.56□□□□□ -0.08
RAPH1Q70E73 BCRP1-201ENST00000444246 691 ntBASIC14.56□□□□□ -0.08
RAPH1Q70E73 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAPH1Q70E73 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
RAPH1Q70E73 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAPH1Q70E73 ALG3P1-201ENST00000508806 1114 ntBASIC14.56□□□□□ -0.08
RAPH1Q70E73 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.56□□□□□ -0.08
RAPH1Q70E73 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.56□□□□□ -0.08
RAPH1Q70E73 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.56□□□□□ -0.08
RAPH1Q70E73 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.56□□□□□ -0.08
RAPH1Q70E73 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.56□□□□□ -0.08
RAPH1Q70E73 AC004899.2-201ENST00000622993 3860 ntBASIC14.56□□□□□ -0.08
RAPH1Q70E73 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.56□□□□□ -0.08
RAPH1Q70E73 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAPH1Q70E73 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAPH1Q70E73 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.56□□□□□ -0.08
RAPH1Q70E73 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAPH1Q70E73 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAPH1Q70E73 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAPH1Q70E73 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAPH1Q70E73 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAPH1Q70E73 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RAPH1Q70E73 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAPH1Q70E73 AP000593.2-201ENST00000542775 1433 ntBASIC14.56□□□□□ -0.08
RAPH1Q70E73 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAPH1Q70E73 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAPH1Q70E73 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAPH1Q70E73 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.56□□□□□ -0.08
RAPH1Q70E73 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAPH1Q70E73 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAPH1Q70E73 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAPH1Q70E73 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
RAPH1Q70E73 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RAPH1Q70E73 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAPH1Q70E73 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.56□□□□□ -0.08
RAPH1Q70E73 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
RAPH1Q70E73 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.55□□□□□ -0.08
RAPH1Q70E73 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAPH1Q70E73 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
RAPH1Q70E73 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.55□□□□□ -0.08
RAPH1Q70E73 AL138709.1-201ENST00000614840 1693 ntBASIC14.55□□□□□ -0.08
RAPH1Q70E73 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAPH1Q70E73 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAPH1Q70E73 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC14.55□□□□□ -0.08
RAPH1Q70E73 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.55□□□□□ -0.08
RAPH1Q70E73 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
RAPH1Q70E73 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.55□□□□□ -0.08
RAPH1Q70E73 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
RAPH1Q70E73 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
RAPH1Q70E73 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAPH1Q70E73 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAPH1Q70E73 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC14.55□□□□□ -0.08
RAPH1Q70E73 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC14.55□□□□□ -0.08
RAPH1Q70E73 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAPH1Q70E73 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAPH1Q70E73 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAPH1Q70E73 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAPH1Q70E73 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAPH1Q70E73 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAPH1Q70E73 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAPH1Q70E73 DGCR5-201ENST00000399539 862 ntBASIC14.55□□□□□ -0.08
RAPH1Q70E73 RN7SKP175-201ENST00000408472 289 ntBASIC14.55□□□□□ -0.08
RAPH1Q70E73 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAPH1Q70E73 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.55□□□□□ -0.08
RAPH1Q70E73 AL355864.2-201ENST00000447420 863 ntBASIC14.55□□□□□ -0.08
RAPH1Q70E73 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.55□□□□□ -0.08
RAPH1Q70E73 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.55□□□□□ -0.08
RAPH1Q70E73 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
RAPH1Q70E73 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.55□□□□□ -0.08
RAPH1Q70E73 TP53TG3HP-202ENST00000569755 579 ntBASIC14.55□□□□□ -0.08
RAPH1Q70E73 MIR5189-201ENST00000577370 114 ntBASIC14.55□□□□□ -0.08
RAPH1Q70E73 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAPH1Q70E73 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.55□□□□□ -0.08
RAPH1Q70E73 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
RAPH1Q70E73 AC010319.3-201ENST00000597028 470 ntBASIC14.55□□□□□ -0.08
RAPH1Q70E73 AL096865.1-201ENST00000606796 927 ntBASIC14.55□□□□□ -0.08
RAPH1Q70E73 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RAPH1Q70E73 AC023794.5-201ENST00000564380 2157 ntBASIC14.55□□□□□ -0.08
RAPH1Q70E73 TUBB8P4-201ENST00000511806 1324 ntBASIC14.55□□□□□ -0.08
RAPH1Q70E73 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms