Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARS2Q5ST30 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC15.29■□□□□ 0.04
VARS2Q5ST30 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARS2Q5ST30 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARS2Q5ST30 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARS2Q5ST30 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.29■□□□□ 0.04
VARS2Q5ST30 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.29■□□□□ 0.04
VARS2Q5ST30 CDC23-201ENST00000394884 1079 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VARS2Q5ST30 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
VARS2Q5ST30 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARS2Q5ST30 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VARS2Q5ST30 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC15.29■□□□□ 0.04
VARS2Q5ST30 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.29■□□□□ 0.04
VARS2Q5ST30 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.29■□□□□ 0.04
VARS2Q5ST30 AL627422.1-201ENST00000434104 580 ntBASIC15.29■□□□□ 0.04
VARS2Q5ST30 RPL13AP19-201ENST00000434320 584 ntBASIC15.29■□□□□ 0.04
VARS2Q5ST30 AC017099.1-201ENST00000448261 1028 ntBASIC15.29■□□□□ 0.04
VARS2Q5ST30 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC15.29■□□□□ 0.04
VARS2Q5ST30 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
VARS2Q5ST30 PPP1R26-AS1-201ENST00000455039 643 ntTSL 4 BASIC15.29■□□□□ 0.04
VARS2Q5ST30 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VARS2Q5ST30 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.29■□□□□ 0.04
VARS2Q5ST30 USP9YP2-201ENST00000504503 1000 ntBASIC15.29■□□□□ 0.04
VARS2Q5ST30 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.29■□□□□ 0.04
VARS2Q5ST30 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC15.29■□□□□ 0.04
VARS2Q5ST30 USP9YP1-201ENST00000513521 1002 ntBASIC15.29■□□□□ 0.04
VARS2Q5ST30 AL031713.1-201ENST00000564813 661 ntBASIC15.29■□□□□ 0.04
VARS2Q5ST30 AC012309.1-203ENST00000585860 965 ntTSL 5 BASIC15.29■□□□□ 0.04
VARS2Q5ST30 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.29■□□□□ 0.04
VARS2Q5ST30 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.29■□□□□ 0.04
VARS2Q5ST30 AC007881.3-201ENST00000608897 607 ntBASIC15.29■□□□□ 0.04
VARS2Q5ST30 AC104506.1-201ENST00000609247 429 ntBASIC15.29■□□□□ 0.04
VARS2Q5ST30 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC15.29■□□□□ 0.04
VARS2Q5ST30 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARS2Q5ST30 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARS2Q5ST30 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARS2Q5ST30 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARS2Q5ST30 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.29■□□□□ 0.04
VARS2Q5ST30 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.29■□□□□ 0.04
VARS2Q5ST30 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
VARS2Q5ST30 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VARS2Q5ST30 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
VARS2Q5ST30 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
VARS2Q5ST30 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VARS2Q5ST30 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.28■□□□□ 0.04
VARS2Q5ST30 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.28■□□□□ 0.04
VARS2Q5ST30 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VARS2Q5ST30 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VARS2Q5ST30 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
VARS2Q5ST30 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
VARS2Q5ST30 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
VARS2Q5ST30 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
VARS2Q5ST30 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.28■□□□□ 0.04
VARS2Q5ST30 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
VARS2Q5ST30 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
VARS2Q5ST30 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
VARS2Q5ST30 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.28■□□□□ 0.04
VARS2Q5ST30 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.28■□□□□ 0.04
VARS2Q5ST30 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
VARS2Q5ST30 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VARS2Q5ST30 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC15.28■□□□□ 0.04
VARS2Q5ST30 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC15.28■□□□□ 0.04
VARS2Q5ST30 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC15.28■□□□□ 0.04
VARS2Q5ST30 OR8T1P-201ENST00000421347 918 ntBASIC15.28■□□□□ 0.04
VARS2Q5ST30 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
VARS2Q5ST30 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.28■□□□□ 0.04
VARS2Q5ST30 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC15.28■□□□□ 0.04
VARS2Q5ST30 CHCHD2P9-201ENST00000461726 456 ntBASIC15.28■□□□□ 0.04
VARS2Q5ST30 RN7SL8P-201ENST00000461771 266 ntBASIC15.28■□□□□ 0.04
VARS2Q5ST30 ALG1L13P-202ENST00000519320 584 ntBASIC15.28■□□□□ 0.04
VARS2Q5ST30 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC15.28■□□□□ 0.04
VARS2Q5ST30 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VARS2Q5ST30 NPM1P43-201ENST00000558669 786 ntBASIC15.28■□□□□ 0.04
VARS2Q5ST30 AC135983.4-201ENST00000564116 1262 ntBASIC15.28■□□□□ 0.04
VARS2Q5ST30 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
VARS2Q5ST30 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC15.28■□□□□ 0.04
VARS2Q5ST30 ZNF92P2-201ENST00000600543 1059 ntBASIC15.28■□□□□ 0.04
VARS2Q5ST30 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
VARS2Q5ST30 AC023510.2-201ENST00000622162 746 ntBASIC15.28■□□□□ 0.04
VARS2Q5ST30 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VARS2Q5ST30 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VARS2Q5ST30 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.28■□□□□ 0.04
VARS2Q5ST30 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VARS2Q5ST30 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VARS2Q5ST30 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
VARS2Q5ST30 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
VARS2Q5ST30 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VARS2Q5ST30 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VARS2Q5ST30 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.27■□□□□ 0.04
VARS2Q5ST30 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.27■□□□□ 0.04
VARS2Q5ST30 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
VARS2Q5ST30 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
VARS2Q5ST30 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VARS2Q5ST30 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
VARS2Q5ST30 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.27■□□□□ 0.04
VARS2Q5ST30 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC15.27■□□□□ 0.04
VARS2Q5ST30 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
VARS2Q5ST30 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VARS2Q5ST30 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VARS2Q5ST30 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms