Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 AC005498.2-205ENST00000593218 784 ntBASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 AC004466.1-201ENST00000599515 1080 ntBASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 AL844908.2-201ENST00000609461 460 ntBASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 AL603764.1-201ENST00000636452 321 ntBASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 BTBD7P1-201ENST00000447253 1453 ntBASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 AC004623.1-201ENST00000624592 2127 ntBASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 AL589987.1-201ENST00000453380 819 ntBASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 GIMAP3P-201ENST00000495150 836 ntBASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 SPDYE22P-201ENST00000582158 798 ntBASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 AC009118.2-201ENST00000613275 655 ntBASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 VENTXP1-201ENST00000569334 2716 ntBASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 AL590440.2-201ENST00000641973 1595 ntBASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ANKRD55Q3KP44 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
ANKRD55Q3KP44 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
ANKRD55Q3KP44 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
ANKRD55Q3KP44 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12□□□□□ -0.49
ANKRD55Q3KP44 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
ANKRD55Q3KP44 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms