Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 AC011742.3-201ENST00000439053 820 ntBASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 KRT8P13-201ENST00000463294 1010 ntBASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 AC020914.3-201ENST00000594712 304 ntBASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 AL805961.1-203ENST00000641078 1258 ntBASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 LINC01815-202ENST00000641468 1409 ntBASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 AC005840.4-201ENST00000541242 2494 ntBASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 TUBBP5-203ENST00000508529 1334 ntBASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 LINC01165-201ENST00000445190 1623 ntBASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 AGAP10P-201ENST00000454844 2418 ntBASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 GPAA1P2-201ENST00000417923 928 ntBASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 RN7SL277P-201ENST00000481521 288 ntBASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 AC093752.3-201ENST00000567343 901 ntBASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 AL022334.2-201ENST00000610000 484 ntBASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 AC244452.3-201ENST00000636814 210 ntBASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 AL590824.1-201ENST00000403828 1349 ntBASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms