Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.11■□□□□ 0.01
IRX4P78413 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.11■□□□□ 0.01
IRX4P78413 AC152010.1-201ENST00000415779 2006 ntBASIC15.11■□□□□ 0.01
IRX4P78413 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.11■□□□□ 0.01
IRX4P78413 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.11■□□□□ 0.01
IRX4P78413 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IRX4P78413 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
IRX4P78413 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.11■□□□□ 0.01
IRX4P78413 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IRX4P78413 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.11■□□□□ 0.01
IRX4P78413 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
IRX4P78413 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
IRX4P78413 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.11■□□□□ 0.01
IRX4P78413 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.11■□□□□ 0.01
IRX4P78413 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC15.11■□□□□ 0.01
IRX4P78413 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
IRX4P78413 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.11■□□□□ 0.01
IRX4P78413 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
IRX4P78413 SAMD11P1-201ENST00000571429 661 ntBASIC15.11■□□□□ 0.01
IRX4P78413 PPY2P-201ENST00000582808 702 ntBASIC15.11■□□□□ 0.01
IRX4P78413 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
IRX4P78413 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC15.11■□□□□ 0.01
IRX4P78413 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
IRX4P78413 AC091544.8-201ENST00000619490 361 ntBASIC15.11■□□□□ 0.01
IRX4P78413 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.11■□□□□ 0.01
IRX4P78413 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.11■□□□□ 0.01
IRX4P78413 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.11■□□□□ 0.01
IRX4P78413 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.11■□□□□ 0.01
IRX4P78413 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
IRX4P78413 AL645728.2-202ENST00000641679 227 ntBASIC15.11■□□□□ 0.01
IRX4P78413 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.11■□□□□ 0.01
IRX4P78413 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
IRX4P78413 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
IRX4P78413 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IRX4P78413 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
IRX4P78413 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IRX4P78413 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.11■□□□□ 0.01
IRX4P78413 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
IRX4P78413 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IRX4P78413 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC15.11■□□□□ 0.01
IRX4P78413 AC092978.1-202ENST00000637590 1327 ntBASIC15.11■□□□□ 0.01
IRX4P78413 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IRX4P78413 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IRX4P78413 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IRX4P78413 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
IRX4P78413 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.1■□□□□ 0.01
IRX4P78413 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
IRX4P78413 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
IRX4P78413 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.1■□□□□ 0.01
IRX4P78413 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.1■□□□□ 0.01
IRX4P78413 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
IRX4P78413 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.1■□□□□ 0.01
IRX4P78413 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.1■□□□□ 0.01
IRX4P78413 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 AL008707.1-201ENST00000422498 534 ntBASIC15.1■□□□□ 0.01
IRX4P78413 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
IRX4P78413 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.1■□□□□ 0.01
IRX4P78413 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.1■□□□□ 0.01
IRX4P78413 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.1■□□□□ 0.01
IRX4P78413 AC005730.2-201ENST00000564549 1184 ntBASIC15.1■□□□□ 0.01
IRX4P78413 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.1■□□□□ 0.01
IRX4P78413 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
IRX4P78413 AC079336.7-201ENST00000623428 1078 ntBASIC15.1■□□□□ 0.01
IRX4P78413 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.1■□□□□ 0.01
IRX4P78413 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.1■□□□□ 0.01
IRX4P78413 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
IRX4P78413 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
IRX4P78413 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
IRX4P78413 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
IRX4P78413 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
IRX4P78413 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.1■□□□□ 0.01
IRX4P78413 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC15.1■□□□□ 0.01
IRX4P78413 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms