Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.56□□□□□ -0.4
UBA52P62987 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBA52P62987 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
UBA52P62987 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
UBA52P62987 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBA52P62987 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBA52P62987 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
UBA52P62987 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UBA52P62987 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBA52P62987 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
UBA52P62987 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBA52P62987 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBA52P62987 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UBA52P62987 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.55□□□□□ -0.4
UBA52P62987 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
UBA52P62987 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBA52P62987 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBA52P62987 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
UBA52P62987 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBA52P62987 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBA52P62987 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.55□□□□□ -0.4
UBA52P62987 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
UBA52P62987 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.55□□□□□ -0.4
UBA52P62987 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
UBA52P62987 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.55□□□□□ -0.4
UBA52P62987 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBA52P62987 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.55□□□□□ -0.4
UBA52P62987 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.55□□□□□ -0.4
UBA52P62987 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
UBA52P62987 AC106760.1-201ENST00000508690 800 ntBASIC12.55□□□□□ -0.4
UBA52P62987 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
UBA52P62987 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.55□□□□□ -0.4
UBA52P62987 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.55□□□□□ -0.4
UBA52P62987 AC005252.2-201ENST00000624630 1141 ntBASIC12.55□□□□□ -0.4
UBA52P62987 RHOXF1P1-202ENST00000635473 501 ntBASIC12.55□□□□□ -0.4
UBA52P62987 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBA52P62987 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
UBA52P62987 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
UBA52P62987 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBA52P62987 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.55□□□□□ -0.4
UBA52P62987 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBA52P62987 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBA52P62987 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
UBA52P62987 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.55□□□□□ -0.4
UBA52P62987 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UBA52P62987 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBA52P62987 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.55□□□□□ -0.4
UBA52P62987 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBA52P62987 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.55□□□□□ -0.4
UBA52P62987 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UBA52P62987 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
UBA52P62987 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
UBA52P62987 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBA52P62987 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.55□□□□□ -0.4
UBA52P62987 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBA52P62987 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.55□□□□□ -0.4
UBA52P62987 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
UBA52P62987 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UBA52P62987 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UBA52P62987 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBA52P62987 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.55□□□□□ -0.4
UBA52P62987 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBA52P62987 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBA52P62987 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBA52P62987 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.54□□□□□ -0.4
UBA52P62987 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
UBA52P62987 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.54□□□□□ -0.4
UBA52P62987 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
UBA52P62987 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
UBA52P62987 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
UBA52P62987 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
UBA52P62987 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.54□□□□□ -0.4
UBA52P62987 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.54□□□□□ -0.4
UBA52P62987 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.54□□□□□ -0.4
UBA52P62987 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 C2orf27AP3-201ENST00000434123 579 ntBASIC12.54□□□□□ -0.4
UBA52P62987 PHKG1P2-201ENST00000457537 863 ntBASIC12.54□□□□□ -0.4
UBA52P62987 AC093433.1-201ENST00000458048 571 ntBASIC12.54□□□□□ -0.4
UBA52P62987 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.54□□□□□ -0.4
UBA52P62987 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
UBA52P62987 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.54□□□□□ -0.4
UBA52P62987 KRT90P-201ENST00000549264 1064 ntBASIC12.54□□□□□ -0.4
UBA52P62987 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.54□□□□□ -0.4
UBA52P62987 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.54□□□□□ -0.4
UBA52P62987 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.54□□□□□ -0.4
UBA52P62987 AC244669.2-201ENST00000612320 853 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms