Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CLDN20P56880 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CLDN20P56880 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CLDN20P56880 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CLDN20P56880 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLDN20P56880 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
CLDN20P56880 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CLDN20P56880 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CLDN20P56880 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.27□□□□□ -0.28
CLDN20P56880 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CLDN20P56880 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
CLDN20P56880 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLDN20P56880 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CLDN20P56880 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
CLDN20P56880 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.27□□□□□ -0.28
CLDN20P56880 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLDN20P56880 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.27□□□□□ -0.28
CLDN20P56880 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN20P56880 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN20P56880 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CLDN20P56880 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN20P56880 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.27□□□□□ -0.29
CLDN20P56880 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.27□□□□□ -0.29
CLDN20P56880 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.27□□□□□ -0.29
CLDN20P56880 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.27□□□□□ -0.29
CLDN20P56880 AC021723.1-201ENST00000486306 515 ntBASIC13.27□□□□□ -0.29
CLDN20P56880 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.27□□□□□ -0.29
CLDN20P56880 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN20P56880 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.27□□□□□ -0.29
CLDN20P56880 AC100827.2-201ENST00000563214 1194 ntBASIC13.27□□□□□ -0.29
CLDN20P56880 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.27□□□□□ -0.29
CLDN20P56880 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN20P56880 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN20P56880 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
CLDN20P56880 AL022328.3-201ENST00000607943 679 ntBASIC13.27□□□□□ -0.29
CLDN20P56880 AC007663.3-201ENST00000609632 465 ntBASIC13.27□□□□□ -0.29
CLDN20P56880 AC027601.3-201ENST00000622907 509 ntBASIC13.27□□□□□ -0.29
CLDN20P56880 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CLDN20P56880 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CLDN20P56880 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CLDN20P56880 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.27□□□□□ -0.29
CLDN20P56880 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.27□□□□□ -0.29
CLDN20P56880 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN20P56880 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
CLDN20P56880 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN20P56880 KRT8P24-201ENST00000560290 1559 ntBASIC13.27□□□□□ -0.29
CLDN20P56880 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN20P56880 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN20P56880 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN20P56880 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
CLDN20P56880 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN20P56880 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN20P56880 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
CLDN20P56880 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN20P56880 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN20P56880 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.27□□□□□ -0.29
CLDN20P56880 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.27□□□□□ -0.29
CLDN20P56880 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN20P56880 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN20P56880 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN20P56880 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.27□□□□□ -0.29
CLDN20P56880 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.26□□□□□ -0.29
CLDN20P56880 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CLDN20P56880 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.26□□□□□ -0.29
CLDN20P56880 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN20P56880 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN20P56880 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.26□□□□□ -0.29
CLDN20P56880 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN20P56880 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.26□□□□□ -0.29
CLDN20P56880 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN20P56880 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CLDN20P56880 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN20P56880 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
CLDN20P56880 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN20P56880 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.26□□□□□ -0.29
CLDN20P56880 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN20P56880 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN20P56880 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.26□□□□□ -0.29
CLDN20P56880 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CLDN20P56880 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN20P56880 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.26□□□□□ -0.29
CLDN20P56880 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.26□□□□□ -0.29
CLDN20P56880 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.26□□□□□ -0.29
CLDN20P56880 AC244394.1-201ENST00000435000 1665 ntBASIC13.26□□□□□ -0.29
CLDN20P56880 AC006033.1-201ENST00000440505 426 ntBASIC13.26□□□□□ -0.29
CLDN20P56880 KLF2P1-201ENST00000447438 1042 ntBASIC13.26□□□□□ -0.29
CLDN20P56880 RNMTL1P1-201ENST00000454103 560 ntBASIC13.26□□□□□ -0.29
CLDN20P56880 ZNF767P-206ENST00000513792 565 ntBASIC13.26□□□□□ -0.29
CLDN20P56880 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
CLDN20P56880 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.26□□□□□ -0.29
CLDN20P56880 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN20P56880 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN20P56880 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms