Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PDX1P52945 MIR4522-201ENST00000584932 87 ntBASIC14□□□□□ -0.17
PDX1P52945 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC14□□□□□ -0.17
PDX1P52945 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
PDX1P52945 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14□□□□□ -0.17
PDX1P52945 AP001065.2-201ENST00000617205 644 ntBASIC14□□□□□ -0.17
PDX1P52945 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PDX1P52945 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
PDX1P52945 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDX1P52945 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PDX1P52945 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PDX1P52945 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDX1P52945 R3HDM2P2-201ENST00000401880 2116 ntBASIC14□□□□□ -0.17
PDX1P52945 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PDX1P52945 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14□□□□□ -0.17
PDX1P52945 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDX1P52945 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PDX1P52945 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14□□□□□ -0.17
PDX1P52945 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDX1P52945 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDX1P52945 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDX1P52945 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.99□□□□□ -0.17
PDX1P52945 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.99□□□□□ -0.17
PDX1P52945 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.99□□□□□ -0.17
PDX1P52945 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.99□□□□□ -0.17
PDX1P52945 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDX1P52945 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.99□□□□□ -0.17
PDX1P52945 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDX1P52945 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDX1P52945 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.99□□□□□ -0.17
PDX1P52945 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDX1P52945 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PDX1P52945 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDX1P52945 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDX1P52945 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
PDX1P52945 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
PDX1P52945 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDX1P52945 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDX1P52945 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDX1P52945 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDX1P52945 HPGD-203ENST00000422112 805 ntTSL 2 BASIC13.99□□□□□ -0.17
PDX1P52945 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC13.99□□□□□ -0.17
PDX1P52945 RPL13AP19-201ENST00000434320 584 ntBASIC13.99□□□□□ -0.17
PDX1P52945 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDX1P52945 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDX1P52945 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDX1P52945 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC13.99□□□□□ -0.17
PDX1P52945 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC13.99□□□□□ -0.17
PDX1P52945 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC13.99□□□□□ -0.17
PDX1P52945 AC003686.1-201ENST00000550956 1034 ntBASIC13.99□□□□□ -0.17
PDX1P52945 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC13.99□□□□□ -0.17
PDX1P52945 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
PDX1P52945 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDX1P52945 MIR4649-201ENST00000582839 64 ntBASIC13.99□□□□□ -0.17
PDX1P52945 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.99□□□□□ -0.17
PDX1P52945 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.99□□□□□ -0.17
PDX1P52945 HLA-C-210ENST00000640219 976 ntBASIC13.99□□□□□ -0.17
PDX1P52945 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDX1P52945 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.99□□□□□ -0.17
PDX1P52945 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDX1P52945 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.99□□□□□ -0.17
PDX1P52945 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PDX1P52945 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDX1P52945 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
PDX1P52945 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDX1P52945 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.99□□□□□ -0.17
PDX1P52945 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDX1P52945 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.99□□□□□ -0.17
PDX1P52945 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
PDX1P52945 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.99□□□□□ -0.17
PDX1P52945 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
PDX1P52945 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.99□□□□□ -0.17
PDX1P52945 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDX1P52945 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDX1P52945 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDX1P52945 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDX1P52945 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDX1P52945 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
PDX1P52945 KRT8P31-201ENST00000504812 1408 ntBASIC13.98□□□□□ -0.17
PDX1P52945 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PDX1P52945 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.98□□□□□ -0.17
PDX1P52945 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.98□□□□□ -0.17
PDX1P52945 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PDX1P52945 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.98□□□□□ -0.17
PDX1P52945 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDX1P52945 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDX1P52945 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.98□□□□□ -0.17
PDX1P52945 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PDX1P52945 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDX1P52945 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDX1P52945 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.98□□□□□ -0.17
PDX1P52945 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
PDX1P52945 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.98□□□□□ -0.17
PDX1P52945 BX640514.1-201ENST00000583223 1918 ntBASIC13.98□□□□□ -0.17
PDX1P52945 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDX1P52945 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PDX1P52945 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
PDX1P52945 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.98□□□□□ -0.17
PDX1P52945 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PDX1P52945 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms