Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.98□□□□□ -0.33
ATRXP46100 CCND3P1-201ENST00000438347 580 ntBASIC12.98□□□□□ -0.33
ATRXP46100 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATRXP46100 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC12.98□□□□□ -0.33
ATRXP46100 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC12.98□□□□□ -0.33
ATRXP46100 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ATRXP46100 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ATRXP46100 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC12.98□□□□□ -0.33
ATRXP46100 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ATRXP46100 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.98□□□□□ -0.33
ATRXP46100 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.97□□□□□ -0.33
ATRXP46100 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC12.97□□□□□ -0.33
ATRXP46100 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.97□□□□□ -0.33
ATRXP46100 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
ATRXP46100 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC12.97□□□□□ -0.33
ATRXP46100 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC12.97□□□□□ -0.33
ATRXP46100 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.97□□□□□ -0.33
ATRXP46100 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC12.97□□□□□ -0.33
ATRXP46100 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.97□□□□□ -0.33
ATRXP46100 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 U73169.1-201ENST00000395152 367 ntBASIC12.97□□□□□ -0.33
ATRXP46100 GALP-202ENST00000440823 889 ntTSL 5 BASIC12.97□□□□□ -0.33
ATRXP46100 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC12.97□□□□□ -0.33
ATRXP46100 AL359091.4-201ENST00000610052 409 ntBASIC12.97□□□□□ -0.33
ATRXP46100 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.97□□□□□ -0.33
ATRXP46100 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
ATRXP46100 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.97□□□□□ -0.33
ATRXP46100 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.97□□□□□ -0.33
ATRXP46100 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.97□□□□□ -0.33
ATRXP46100 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ATRXP46100 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.97□□□□□ -0.33
ATRXP46100 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 TUBA3GP-201ENST00000410028 1325 ntBASIC12.97□□□□□ -0.33
ATRXP46100 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC12.97□□□□□ -0.33
ATRXP46100 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC12.97□□□□□ -0.33
ATRXP46100 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 FAM25E-201ENST00000411791 322 ntTSL 3 BASIC12.97□□□□□ -0.33
ATRXP46100 LINC00265-2P-201ENST00000413372 782 ntBASIC12.97□□□□□ -0.33
ATRXP46100 CRIP1P2-201ENST00000425396 228 ntBASIC12.97□□□□□ -0.33
ATRXP46100 AC025594.1-201ENST00000469533 543 ntBASIC12.97□□□□□ -0.33
ATRXP46100 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC12.97□□□□□ -0.33
ATRXP46100 GIMD1-201ENST00000507153 654 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ATRXP46100 AC005740.1-201ENST00000515639 522 ntBASIC12.97□□□□□ -0.33
ATRXP46100 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC12.97□□□□□ -0.33
ATRXP46100 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 GOLGA2P10-201ENST00000550961 817 ntBASIC12.97□□□□□ -0.33
ATRXP46100 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC12.97□□□□□ -0.33
ATRXP46100 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC12.97□□□□□ -0.33
ATRXP46100 KRT8P34-201ENST00000577607 1044 ntBASIC12.97□□□□□ -0.33
ATRXP46100 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC12.97□□□□□ -0.33
ATRXP46100 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ATRXP46100 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATRXP46100 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.97□□□□□ -0.33
ATRXP46100 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.96□□□□□ -0.33
ATRXP46100 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATRXP46100 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
ATRXP46100 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
ATRXP46100 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATRXP46100 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ATRXP46100 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
ATRXP46100 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATRXP46100 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
ATRXP46100 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.96□□□□□ -0.33
ATRXP46100 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATRXP46100 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATRXP46100 POP5-201ENST00000341039 913 ntTSL 2 BASIC12.96□□□□□ -0.33
ATRXP46100 OR4C14P-201ENST00000440929 923 ntBASIC12.96□□□□□ -0.33
ATRXP46100 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
ATRXP46100 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ATRXP46100 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
ATRXP46100 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC12.96□□□□□ -0.33
ATRXP46100 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC12.96□□□□□ -0.33
ATRXP46100 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATRXP46100 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATRXP46100 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms