Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 AC106827.1-201ENST00000366454 431 ntBASIC13.96□□□□□ -0.17
HOXA6P31267 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HOXA6P31267 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HOXA6P31267 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
HOXA6P31267 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC13.96□□□□□ -0.17
HOXA6P31267 AC027612.2-202ENST00000445955 1199 ntBASIC13.96□□□□□ -0.17
HOXA6P31267 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HOXA6P31267 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC13.96□□□□□ -0.17
HOXA6P31267 AC113347.2-201ENST00000512350 279 ntBASIC13.96□□□□□ -0.17
HOXA6P31267 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC13.96□□□□□ -0.17
HOXA6P31267 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC13.96□□□□□ -0.17
HOXA6P31267 SRP14-208ENST00000560773 468 ntTSL 3 BASIC13.96□□□□□ -0.17
HOXA6P31267 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC13.96□□□□□ -0.17
HOXA6P31267 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC13.96□□□□□ -0.17
HOXA6P31267 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
HOXA6P31267 AC004686.1-201ENST00000605113 538 ntBASIC13.96□□□□□ -0.17
HOXA6P31267 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC13.96□□□□□ -0.17
HOXA6P31267 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
HOXA6P31267 CSTP2-201ENST00000610599 398 ntBASIC13.96□□□□□ -0.17
HOXA6P31267 AC139713.2-207ENST00000641556 1292 ntBASIC13.96□□□□□ -0.17
HOXA6P31267 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXA6P31267 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
HOXA6P31267 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXA6P31267 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HOXA6P31267 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
HOXA6P31267 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.96□□□□□ -0.17
HOXA6P31267 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXA6P31267 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXA6P31267 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXA6P31267 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HOXA6P31267 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HOXA6P31267 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.96□□□□□ -0.18
HOXA6P31267 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HOXA6P31267 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
HOXA6P31267 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HOXA6P31267 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.96□□□□□ -0.18
HOXA6P31267 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
HOXA6P31267 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
HOXA6P31267 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.95□□□□□ -0.18
HOXA6P31267 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
HOXA6P31267 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 SARS-202ENST00000369923 1882 ntTSL 5 BASIC13.95□□□□□ -0.18
HOXA6P31267 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.95□□□□□ -0.18
HOXA6P31267 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
HOXA6P31267 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 AL590824.1-201ENST00000403828 1349 ntBASIC13.95□□□□□ -0.18
HOXA6P31267 SALL4P6-201ENST00000429385 1691 ntBASIC13.95□□□□□ -0.18
HOXA6P31267 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.95□□□□□ -0.18
HOXA6P31267 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.95□□□□□ -0.18
HOXA6P31267 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
HOXA6P31267 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.95□□□□□ -0.18
HOXA6P31267 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.95□□□□□ -0.18
HOXA6P31267 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.95□□□□□ -0.18
HOXA6P31267 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 IFNWP2-201ENST00000431203 580 ntBASIC13.95□□□□□ -0.18
HOXA6P31267 KRT8P30-201ENST00000432100 650 ntBASIC13.95□□□□□ -0.18
HOXA6P31267 HIST1H2APS2-201ENST00000454426 370 ntBASIC13.95□□□□□ -0.18
HOXA6P31267 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC13.95□□□□□ -0.18
HOXA6P31267 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.95□□□□□ -0.18
HOXA6P31267 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
HOXA6P31267 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC13.95□□□□□ -0.18
HOXA6P31267 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC13.95□□□□□ -0.18
HOXA6P31267 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC13.95□□□□□ -0.18
HOXA6P31267 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.95□□□□□ -0.18
HOXA6P31267 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
HOXA6P31267 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.95□□□□□ -0.18
HOXA6P31267 AC138035.3-201ENST00000622706 2791 ntBASIC13.95□□□□□ -0.18
HOXA6P31267 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
HOXA6P31267 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HOXA6P31267 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
HOXA6P31267 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 AC008536.3-201ENST00000623282 1599 ntBASIC13.95□□□□□ -0.18
HOXA6P31267 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.95□□□□□ -0.18
HOXA6P31267 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
HOXA6P31267 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 227.4 ms