Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC091271.1-201ENST00000611877 1162 ntBASIC14.31□□□□□ -0.12
VARSP26640 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.31□□□□□ -0.12
VARSP26640 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.31□□□□□ -0.12
VARSP26640 AC006453.4-201ENST00000636949 1252 ntBASIC14.31□□□□□ -0.12
VARSP26640 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VARSP26640 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
VARSP26640 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VARSP26640 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VARSP26640 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.31□□□□□ -0.12
VARSP26640 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VARSP26640 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.31□□□□□ -0.12
VARSP26640 AP000593.2-201ENST00000542775 1433 ntBASIC14.31□□□□□ -0.12
VARSP26640 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
VARSP26640 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
VARSP26640 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VARSP26640 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
VARSP26640 AL354989.2-201ENST00000435838 1540 ntBASIC14.31□□□□□ -0.12
VARSP26640 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VARSP26640 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
VARSP26640 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VARSP26640 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC14.3□□□□□ -0.12
VARSP26640 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VARSP26640 AC015688.4-201ENST00000580780 1647 ntBASIC14.3□□□□□ -0.12
VARSP26640 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.3□□□□□ -0.12
VARSP26640 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
VARSP26640 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
VARSP26640 AC090505.1-201ENST00000430515 1834 ntBASIC14.3□□□□□ -0.12
VARSP26640 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
VARSP26640 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
VARSP26640 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.3□□□□□ -0.12
VARSP26640 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VARSP26640 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VARSP26640 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
VARSP26640 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VARSP26640 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
VARSP26640 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
VARSP26640 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VARSP26640 AC004945.1-201ENST00000416738 983 ntBASIC14.3□□□□□ -0.12
VARSP26640 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.3□□□□□ -0.12
VARSP26640 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC14.3□□□□□ -0.12
VARSP26640 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.3□□□□□ -0.12
VARSP26640 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VARSP26640 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC14.3□□□□□ -0.12
VARSP26640 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.3□□□□□ -0.12
VARSP26640 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.3□□□□□ -0.12
VARSP26640 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.3□□□□□ -0.12
VARSP26640 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.3□□□□□ -0.12
VARSP26640 MIR4683-201ENST00000579659 81 ntBASIC14.3□□□□□ -0.12
VARSP26640 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VARSP26640 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.3□□□□□ -0.12
VARSP26640 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VARSP26640 RETN-203ENST00000629642 400 ntTSL 5 BASIC14.3□□□□□ -0.12
VARSP26640 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
VARSP26640 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
VARSP26640 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VARSP26640 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
VARSP26640 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VARSP26640 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VARSP26640 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VARSP26640 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VARSP26640 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
VARSP26640 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
VARSP26640 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.29□□□□□ -0.12
VARSP26640 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
VARSP26640 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.29□□□□□ -0.12
VARSP26640 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
VARSP26640 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.29□□□□□ -0.12
VARSP26640 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.29□□□□□ -0.12
VARSP26640 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 MIR1202-201ENST00000408529 83 ntBASIC14.29□□□□□ -0.12
VARSP26640 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 KATNBL1P2-201ENST00000433311 835 ntBASIC14.29□□□□□ -0.12
VARSP26640 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VARSP26640 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC14.29□□□□□ -0.12
VARSP26640 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.29□□□□□ -0.12
VARSP26640 GOLGA2P4-201ENST00000441462 777 ntBASIC14.29□□□□□ -0.12
VARSP26640 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.29□□□□□ -0.12
VARSP26640 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.29□□□□□ -0.12
VARSP26640 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 AP001258.2-201ENST00000529891 490 ntBASIC14.29□□□□□ -0.12
VARSP26640 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms