Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC15.21■□□□□ 0.03
PTPN1P18031 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.21■□□□□ 0.03
PTPN1P18031 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.21■□□□□ 0.03
PTPN1P18031 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PTPN1P18031 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.21■□□□□ 0.03
PTPN1P18031 AC134698.3-201ENST00000523880 214 ntBASIC15.21■□□□□ 0.03
PTPN1P18031 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.21■□□□□ 0.03
PTPN1P18031 AC105129.2-201ENST00000559536 390 ntBASIC15.21■□□□□ 0.03
PTPN1P18031 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.21■□□□□ 0.03
PTPN1P18031 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
PTPN1P18031 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN1P18031 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
PTPN1P18031 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
PTPN1P18031 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.21■□□□□ 0.02
PTPN1P18031 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.21■□□□□ 0.02
PTPN1P18031 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
PTPN1P18031 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.21■□□□□ 0.02
PTPN1P18031 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
PTPN1P18031 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PTPN1P18031 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.21■□□□□ 0.02
PTPN1P18031 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN1P18031 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN1P18031 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN1P18031 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN1P18031 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN1P18031 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN1P18031 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN1P18031 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN1P18031 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN1P18031 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PTPN1P18031 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PTPN1P18031 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
PTPN1P18031 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN1P18031 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN1P18031 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN1P18031 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN1P18031 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PTPN1P18031 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.2■□□□□ 0.02
PTPN1P18031 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN1P18031 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN1P18031 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
PTPN1P18031 RPSAP15-201ENST00000448168 861 ntBASIC15.2■□□□□ 0.02
PTPN1P18031 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.2■□□□□ 0.02
PTPN1P18031 AL512310.5-201ENST00000551999 515 ntBASIC15.2■□□□□ 0.02
PTPN1P18031 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN1P18031 KRT8P1-201ENST00000557533 1207 ntBASIC15.2■□□□□ 0.02
PTPN1P18031 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.2■□□□□ 0.02
PTPN1P18031 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN1P18031 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN1P18031 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PTPN1P18031 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN1P18031 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
PTPN1P18031 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.2■□□□□ 0.02
PTPN1P18031 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.2■□□□□ 0.02
PTPN1P18031 AC106872.11-201ENST00000605838 421 ntBASIC15.2■□□□□ 0.02
PTPN1P18031 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN1P18031 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN1P18031 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC15.2■□□□□ 0.02
PTPN1P18031 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN1P18031 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN1P18031 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN1P18031 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PTPN1P18031 AC152010.1-201ENST00000415779 2006 ntBASIC15.2■□□□□ 0.02
PTPN1P18031 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.2■□□□□ 0.02
PTPN1P18031 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN1P18031 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PTPN1P18031 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN1P18031 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN1P18031 AC117489.1-201ENST00000625169 3217 ntBASIC15.2■□□□□ 0.02
PTPN1P18031 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN1P18031 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN1P18031 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN1P18031 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN1P18031 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN1P18031 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN1P18031 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.2■□□□□ 0.02
PTPN1P18031 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.19■□□□□ 0.02
PTPN1P18031 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN1P18031 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PTPN1P18031 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
PTPN1P18031 LINC00115-201ENST00000473798 1317 ntBASIC15.19■□□□□ 0.02
PTPN1P18031 TUBB8P4-201ENST00000511806 1324 ntBASIC15.19■□□□□ 0.02
PTPN1P18031 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN1P18031 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
PTPN1P18031 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.19■□□□□ 0.02
PTPN1P18031 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.19■□□□□ 0.02
PTPN1P18031 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.19■□□□□ 0.02
PTPN1P18031 TBC1D3J-201ENST00000620719 1426 ntBASIC15.19■□□□□ 0.02
PTPN1P18031 LINC01815-202ENST00000641468 1409 ntBASIC15.19■□□□□ 0.02
PTPN1P18031 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN1P18031 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN1P18031 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PTPN1P18031 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.19■□□□□ 0.02
PTPN1P18031 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.19■□□□□ 0.02
PTPN1P18031 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN1P18031 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN1P18031 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.19■□□□□ 0.02
PTPN1P18031 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PTPN1P18031 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN1P18031 KRT17P5-201ENST00000332088 839 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms