Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.24■□□□□ 0.03
CCDC130P13994 AL022334.2-201ENST00000610000 484 ntBASIC15.24■□□□□ 0.03
CCDC130P13994 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC130P13994 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC130P13994 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC130P13994 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CCDC130P13994 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC130P13994 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC130P13994 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC130P13994 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC130P13994 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC130P13994 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC130P13994 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC130P13994 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC130P13994 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC130P13994 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC130P13994 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CCDC130P13994 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC130P13994 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC130P13994 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC130P13994 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CCDC130P13994 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC130P13994 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
CCDC130P13994 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC130P13994 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CCDC130P13994 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC130P13994 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC130P13994 FRMPD2B-201ENST00000431305 1347 ntBASIC15.23■□□□□ 0.03
CCDC130P13994 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
CCDC130P13994 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC130P13994 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC130P13994 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC130P13994 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC130P13994 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC130P13994 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC130P13994 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC130P13994 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC130P13994 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC130P13994 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC130P13994 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC130P13994 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC130P13994 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC130P13994 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC130P13994 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC130P13994 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC130P13994 AL161670.2-201ENST00000557650 1227 ntBASIC15.23■□□□□ 0.03
CCDC130P13994 AC140658.4-201ENST00000561990 352 ntBASIC15.23■□□□□ 0.03
CCDC130P13994 MIR3619-201ENST00000579667 83 ntBASIC15.23■□□□□ 0.03
CCDC130P13994 AF254983.2-201ENST00000612331 135 ntBASIC15.23■□□□□ 0.03
CCDC130P13994 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC130P13994 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC130P13994 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CCDC130P13994 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC130P13994 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC130P13994 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC130P13994 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CCDC130P13994 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC130P13994 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC130P13994 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC130P13994 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC130P13994 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CCDC130P13994 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CCDC130P13994 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC130P13994 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC130P13994 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.22■□□□□ 0.03
CCDC130P13994 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC130P13994 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC130P13994 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC130P13994 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC130P13994 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCDC130P13994 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC130P13994 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC130P13994 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCDC130P13994 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC130P13994 HSPA7-201ENST00000445535 1927 ntBASIC15.22■□□□□ 0.03
CCDC130P13994 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CCDC130P13994 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CCDC130P13994 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC130P13994 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC130P13994 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC130P13994 PDIA3P2-201ENST00000428073 158 ntBASIC15.22■□□□□ 0.03
CCDC130P13994 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC130P13994 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC130P13994 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC130P13994 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC130P13994 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC130P13994 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC130P13994 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC130P13994 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC130P13994 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CCDC130P13994 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC130P13994 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC130P13994 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC130P13994 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC130P13994 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC130P13994 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC130P13994 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.22■□□□□ 0.03
CCDC130P13994 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC130P13994 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC130P13994 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms