Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL2P13500 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.59□□□□□ -0.39
CCL2P13500 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
CCL2P13500 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.59□□□□□ -0.39
CCL2P13500 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL2P13500 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CCL2P13500 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.59□□□□□ -0.39
CCL2P13500 AC090164.2-201ENST00000611487 516 ntBASIC12.59□□□□□ -0.39
CCL2P13500 AC133540.1-201ENST00000620845 1019 ntBASIC12.59□□□□□ -0.39
CCL2P13500 GPR182-203ENST00000622922 591 ntBASIC12.59□□□□□ -0.39
CCL2P13500 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.59□□□□□ -0.39
CCL2P13500 AC092299.1-201ENST00000632679 757 ntBASIC12.59□□□□□ -0.39
CCL2P13500 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.59□□□□□ -0.39
CCL2P13500 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL2P13500 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CCL2P13500 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.59□□□□□ -0.39
CCL2P13500 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL2P13500 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL2P13500 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL2P13500 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL2P13500 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL2P13500 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.59□□□□□ -0.39
CCL2P13500 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.59□□□□□ -0.39
CCL2P13500 AC064801.2-201ENST00000625052 1303 ntBASIC12.59□□□□□ -0.39
CCL2P13500 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CCL2P13500 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL2P13500 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.59□□□□□ -0.39
CCL2P13500 AC020910.6-201ENST00000623084 1459 ntBASIC12.59□□□□□ -0.39
CCL2P13500 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL2P13500 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.59□□□□□ -0.39
CCL2P13500 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
CCL2P13500 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
CCL2P13500 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
CCL2P13500 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CCL2P13500 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL2P13500 FAM90A7P-201ENST00000382628 1395 ntBASIC12.58□□□□□ -0.4
CCL2P13500 FAM90A23P-201ENST00000400136 1395 ntBASIC12.58□□□□□ -0.4
CCL2P13500 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CCL2P13500 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL2P13500 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCL2P13500 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.58□□□□□ -0.4
CCL2P13500 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.58□□□□□ -0.4
CCL2P13500 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL2P13500 AC016397.2-201ENST00000624848 1985 ntBASIC12.58□□□□□ -0.4
CCL2P13500 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.58□□□□□ -0.4
CCL2P13500 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.58□□□□□ -0.4
CCL2P13500 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
CCL2P13500 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL2P13500 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.58□□□□□ -0.4
CCL2P13500 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCL2P13500 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CCL2P13500 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL2P13500 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL2P13500 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL2P13500 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL2P13500 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CCL2P13500 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL2P13500 DPM3-202ENST00000368399 517 ntBASIC12.58□□□□□ -0.4
CCL2P13500 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCL2P13500 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCL2P13500 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.58□□□□□ -0.4
CCL2P13500 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CCL2P13500 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCL2P13500 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC12.58□□□□□ -0.4
CCL2P13500 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.58□□□□□ -0.4
CCL2P13500 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL2P13500 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCL2P13500 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CCL2P13500 HLA-J-204ENST00000495278 958 ntBASIC12.58□□□□□ -0.4
CCL2P13500 AC106794.1-201ENST00000506935 792 ntBASIC12.58□□□□□ -0.4
CCL2P13500 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL2P13500 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.58□□□□□ -0.4
CCL2P13500 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.58□□□□□ -0.4
CCL2P13500 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.58□□□□□ -0.4
CCL2P13500 AL022313.4-201ENST00000562756 2046 ntBASIC12.58□□□□□ -0.4
CCL2P13500 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCL2P13500 AC068587.8-201ENST00000641239 219 ntBASIC12.58□□□□□ -0.4
CCL2P13500 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL2P13500 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL2P13500 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL2P13500 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.58□□□□□ -0.4
CCL2P13500 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.58□□□□□ -0.4
CCL2P13500 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.58□□□□□ -0.4
CCL2P13500 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.58□□□□□ -0.4
CCL2P13500 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL2P13500 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL2P13500 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.58□□□□□ -0.4
CCL2P13500 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.57□□□□□ -0.4
CCL2P13500 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCL2P13500 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCL2P13500 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCL2P13500 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.57□□□□□ -0.4
CCL2P13500 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL2P13500 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CCL2P13500 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
CCL2P13500 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CCL2P13500 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL2P13500 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL2P13500 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL2P13500 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms