Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TOP1P11387 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC16.92■□□□□ 0.3
TOP1P11387 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TOP1P11387 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
TOP1P11387 LINC01165-201ENST00000445190 1623 ntBASIC16.92■□□□□ 0.3
TOP1P11387 PPP1R26P4-201ENST00000619065 3527 ntBASIC16.92■□□□□ 0.3
TOP1P11387 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.92■□□□□ 0.3
TOP1P11387 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TOP1P11387 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TOP1P11387 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.92■□□□□ 0.3
TOP1P11387 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.92■□□□□ 0.3
TOP1P11387 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TOP1P11387 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TOP1P11387 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.92■□□□□ 0.3
TOP1P11387 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TOP1P11387 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
TOP1P11387 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TOP1P11387 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.92■□□□□ 0.3
TOP1P11387 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TOP1P11387 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TOP1P11387 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TOP1P11387 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TOP1P11387 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TOP1P11387 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TOP1P11387 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TOP1P11387 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.92■□□□□ 0.3
TOP1P11387 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.92■□□□□ 0.3
TOP1P11387 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.92■□□□□ 0.3
TOP1P11387 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.92■□□□□ 0.3
TOP1P11387 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.92■□□□□ 0.3
TOP1P11387 AC245884.6-201ENST00000515672 1067 ntBASIC16.92■□□□□ 0.3
TOP1P11387 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.92■□□□□ 0.3
TOP1P11387 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
TOP1P11387 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.92■□□□□ 0.3
TOP1P11387 AC090386.2-201ENST00000623010 1039 ntBASIC16.92■□□□□ 0.3
TOP1P11387 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TOP1P11387 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.92■□□□□ 0.3
TOP1P11387 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TOP1P11387 AC015802.1-201ENST00000588104 1449 ntBASIC16.92■□□□□ 0.3
TOP1P11387 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.92■□□□□ 0.3
TOP1P11387 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.92■□□□□ 0.3
TOP1P11387 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.92■□□□□ 0.3
TOP1P11387 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TOP1P11387 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TOP1P11387 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TOP1P11387 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TOP1P11387 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TOP1P11387 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TOP1P11387 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TOP1P11387 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TOP1P11387 LAP3P2-201ENST00000454686 1454 ntBASIC16.92■□□□□ 0.3
TOP1P11387 RN7SL832P-201ENST00000607781 1756 ntBASIC16.92■□□□□ 0.3
TOP1P11387 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.92■□□□□ 0.3
TOP1P11387 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC16.92■□□□□ 0.3
TOP1P11387 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TOP1P11387 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.91■□□□□ 0.3
TOP1P11387 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TOP1P11387 AC090505.1-201ENST00000430515 1834 ntBASIC16.91■□□□□ 0.3
TOP1P11387 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
TOP1P11387 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TOP1P11387 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.91■□□□□ 0.3
TOP1P11387 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TOP1P11387 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TOP1P11387 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TOP1P11387 AC011498.7-201ENST00000624986 2027 ntBASIC16.91■□□□□ 0.3
TOP1P11387 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TOP1P11387 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TOP1P11387 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.91■□□□□ 0.3
TOP1P11387 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.91■□□□□ 0.3
TOP1P11387 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.91■□□□□ 0.3
TOP1P11387 PDIA3P2-201ENST00000428073 158 ntBASIC16.91■□□□□ 0.3
TOP1P11387 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.91■□□□□ 0.3
TOP1P11387 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.91■□□□□ 0.3
TOP1P11387 AC073150.1-201ENST00000450406 1084 ntBASIC16.91■□□□□ 0.3
TOP1P11387 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.91■□□□□ 0.3
TOP1P11387 POU5F1P2-201ENST00000521750 823 ntBASIC16.91■□□□□ 0.3
TOP1P11387 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TOP1P11387 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.91■□□□□ 0.3
TOP1P11387 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.91■□□□□ 0.3
TOP1P11387 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.91■□□□□ 0.3
TOP1P11387 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.91■□□□□ 0.3
TOP1P11387 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.91■□□□□ 0.3
TOP1P11387 AF254983.2-201ENST00000612331 135 ntBASIC16.91■□□□□ 0.3
TOP1P11387 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.91■□□□□ 0.3
TOP1P11387 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TOP1P11387 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TOP1P11387 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TOP1P11387 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TOP1P11387 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TOP1P11387 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TOP1P11387 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TOP1P11387 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC16.91■□□□□ 0.3
TOP1P11387 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TOP1P11387 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.91■□□□□ 0.3
TOP1P11387 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TOP1P11387 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.91■□□□□ 0.3
TOP1P11387 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TOP1P11387 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TOP1P11387 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TOP1P11387 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms