Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC025186.1-201ENST00000478174 870 ntBASIC16.06■□□□□ 0.16
HOXC6P09630 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC16.06■□□□□ 0.16
HOXC6P09630 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC6P09630 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC6P09630 VENTXP3-201ENST00000546480 773 ntBASIC16.06■□□□□ 0.16
HOXC6P09630 CMC2-204ENST00000562713 573 ntTSL 3 BASIC16.06■□□□□ 0.16
HOXC6P09630 CMC2-209ENST00000565108 399 ntTSL 2 BASIC16.06■□□□□ 0.16
HOXC6P09630 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC16.06■□□□□ 0.16
HOXC6P09630 EIF5AP2-201ENST00000585668 1047 ntBASIC16.06■□□□□ 0.16
HOXC6P09630 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC16.06■□□□□ 0.16
HOXC6P09630 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC6P09630 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HOXC6P09630 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC6P09630 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC6P09630 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.06■□□□□ 0.16
HOXC6P09630 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC6P09630 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC6P09630 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC6P09630 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC6P09630 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.06■□□□□ 0.16
HOXC6P09630 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.05■□□□□ 0.16
HOXC6P09630 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.05■□□□□ 0.16
HOXC6P09630 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC6P09630 AMT-256ENST00000638063 1783 ntTSL 5 BASIC16.05■□□□□ 0.16
HOXC6P09630 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC6P09630 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC6P09630 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC6P09630 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC6P09630 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC6P09630 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC6P09630 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC6P09630 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC6P09630 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HOXC6P09630 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC6P09630 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC16.05■□□□□ 0.16
HOXC6P09630 SHMT1P1-201ENST00000419974 1312 ntBASIC16.05■□□□□ 0.16
HOXC6P09630 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC16.05■□□□□ 0.16
HOXC6P09630 KRT18P62-201ENST00000446618 1287 ntBASIC16.05■□□□□ 0.16
HOXC6P09630 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC16.05■□□□□ 0.16
HOXC6P09630 ALG1L3P-201ENST00000503331 765 ntBASIC16.05■□□□□ 0.16
HOXC6P09630 SLC25A15P3-201ENST00000505530 290 ntBASIC16.05■□□□□ 0.16
HOXC6P09630 GDNF-207ENST00000515058 764 ntTSL 5 BASIC16.05■□□□□ 0.16
HOXC6P09630 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
HOXC6P09630 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC16.05■□□□□ 0.16
HOXC6P09630 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC16.05■□□□□ 0.16
HOXC6P09630 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC16.05■□□□□ 0.16
HOXC6P09630 AL132994.1-201ENST00000554098 400 ntBASIC16.05■□□□□ 0.16
HOXC6P09630 AC023824.1-201ENST00000562945 2975 ntBASIC16.05■□□□□ 0.16
HOXC6P09630 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC6P09630 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC6P09630 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HOXC6P09630 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC6P09630 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.05■□□□□ 0.16
HOXC6P09630 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.05■□□□□ 0.16
HOXC6P09630 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC6P09630 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HOXC6P09630 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HOXC6P09630 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HOXC6P09630 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
HOXC6P09630 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HOXC6P09630 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.04■□□□□ 0.16
HOXC6P09630 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.04■□□□□ 0.16
HOXC6P09630 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HOXC6P09630 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HOXC6P09630 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
HOXC6P09630 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HOXC6P09630 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HOXC6P09630 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HOXC6P09630 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HOXC6P09630 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC16.04■□□□□ 0.16
HOXC6P09630 PSAT1P2-201ENST00000426107 972 ntBASIC16.04■□□□□ 0.16
HOXC6P09630 VENTXP4-201ENST00000449029 958 ntBASIC16.04■□□□□ 0.16
HOXC6P09630 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC16.04■□□□□ 0.16
HOXC6P09630 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC16.04■□□□□ 0.16
HOXC6P09630 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC16.04■□□□□ 0.16
HOXC6P09630 AC083801.1-201ENST00000491689 358 ntBASIC16.04■□□□□ 0.16
HOXC6P09630 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC16.04■□□□□ 0.16
HOXC6P09630 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC16.04■□□□□ 0.16
HOXC6P09630 KRT18P37-201ENST00000520711 1282 ntBASIC16.04■□□□□ 0.16
HOXC6P09630 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HOXC6P09630 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC16.04■□□□□ 0.16
HOXC6P09630 AL512310.5-201ENST00000551999 515 ntBASIC16.04■□□□□ 0.16
HOXC6P09630 DLK1-205ENST00000556051 469 ntTSL 2 BASIC16.04■□□□□ 0.16
HOXC6P09630 AC068831.5-201ENST00000557387 328 ntBASIC16.04■□□□□ 0.16
HOXC6P09630 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC16.04■□□□□ 0.16
HOXC6P09630 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC16.04■□□□□ 0.16
HOXC6P09630 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.04■□□□□ 0.16
HOXC6P09630 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HOXC6P09630 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC16.04■□□□□ 0.16
HOXC6P09630 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC16.04■□□□□ 0.16
HOXC6P09630 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HOXC6P09630 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC16.04■□□□□ 0.16
HOXC6P09630 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HOXC6P09630 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HOXC6P09630 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HOXC6P09630 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
HOXC6P09630 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HOXC6P09630 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HOXC6P09630 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HOXC6P09630 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms