Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 VDAC1P7-201ENST00000462417 847 ntBASIC12.45□□□□□ -0.42
HLA-DQB1P01920 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.45□□□□□ -0.42
HLA-DQB1P01920 AC067863.1-201ENST00000494933 530 ntBASIC12.45□□□□□ -0.42
HLA-DQB1P01920 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.45□□□□□ -0.42
HLA-DQB1P01920 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.45□□□□□ -0.42
HLA-DQB1P01920 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC12.45□□□□□ -0.42
HLA-DQB1P01920 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.45□□□□□ -0.42
HLA-DQB1P01920 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
HLA-DQB1P01920 AC004449.1-201ENST00000564240 433 ntBASIC12.45□□□□□ -0.42
HLA-DQB1P01920 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.45□□□□□ -0.42
HLA-DQB1P01920 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
HLA-DQB1P01920 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DQB1P01920 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DQB1P01920 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DQB1P01920 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.45□□□□□ -0.42
HLA-DQB1P01920 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DQB1P01920 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
HLA-DQB1P01920 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
HLA-DQB1P01920 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DQB1P01920 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DQB1P01920 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.45□□□□□ -0.42
HLA-DQB1P01920 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.44□□□□□ -0.42
HLA-DQB1P01920 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 DNAJB3-202ENST00000449667 1266 ntBASIC12.44□□□□□ -0.42
HLA-DQB1P01920 AC009477.1-201ENST00000452936 217 ntBASIC12.44□□□□□ -0.42
HLA-DQB1P01920 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 SPDYE22P-201ENST00000582158 798 ntBASIC12.44□□□□□ -0.42
HLA-DQB1P01920 BX088702.1-201ENST00000610784 235 ntBASIC12.44□□□□□ -0.42
HLA-DQB1P01920 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.44□□□□□ -0.42
HLA-DQB1P01920 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DQB1P01920 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DQB1P01920 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DQB1P01920 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.43□□□□□ -0.42
HLA-DQB1P01920 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DQB1P01920 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DQB1P01920 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DQB1P01920 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
HLA-DQB1P01920 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
HLA-DQB1P01920 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
HLA-DQB1P01920 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DQB1P01920 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DQB1P01920 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DQB1P01920 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DQB1P01920 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
HLA-DQB1P01920 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DQB1P01920 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
HLA-DQB1P01920 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DQB1P01920 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DQB1P01920 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.43□□□□□ -0.42
HLA-DQB1P01920 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DQB1P01920 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DQB1P01920 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms