Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NDUFS3O75489 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NDUFS3O75489 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
NDUFS3O75489 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.39□□□□□ -0.11
NDUFS3O75489 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NDUFS3O75489 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
NDUFS3O75489 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.39□□□□□ -0.11
NDUFS3O75489 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
NDUFS3O75489 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NDUFS3O75489 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.39□□□□□ -0.11
NDUFS3O75489 MTX1P1-201ENST00000440904 838 ntBASIC14.39□□□□□ -0.11
NDUFS3O75489 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 Z93015.1-201ENST00000451718 390 ntBASIC14.39□□□□□ -0.11
NDUFS3O75489 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.39□□□□□ -0.11
NDUFS3O75489 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.39□□□□□ -0.11
NDUFS3O75489 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.39□□□□□ -0.11
NDUFS3O75489 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
NDUFS3O75489 AC005962.1-201ENST00000584100 773 ntBASIC14.39□□□□□ -0.11
NDUFS3O75489 MIR4259-201ENST00000584466 101 ntBASIC14.39□□□□□ -0.11
NDUFS3O75489 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.39□□□□□ -0.11
NDUFS3O75489 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NDUFS3O75489 AC009542.2-202ENST00000619004 1067 ntBASIC14.39□□□□□ -0.11
NDUFS3O75489 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.39□□□□□ -0.11
NDUFS3O75489 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
NDUFS3O75489 Z98259.2-201ENST00000641583 609 ntBASIC14.39□□□□□ -0.11
NDUFS3O75489 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.39□□□□□ -0.11
NDUFS3O75489 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.39□□□□□ -0.11
NDUFS3O75489 PTENP1-202ENST00000532280 3996 ntBASIC14.39□□□□□ -0.11
NDUFS3O75489 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.39□□□□□ -0.11
NDUFS3O75489 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NDUFS3O75489 REXO1L6P-201ENST00000603433 1515 ntBASIC14.39□□□□□ -0.11
NDUFS3O75489 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.39□□□□□ -0.11
NDUFS3O75489 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.39□□□□□ -0.11
NDUFS3O75489 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.39□□□□□ -0.11
NDUFS3O75489 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
NDUFS3O75489 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NDUFS3O75489 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.39□□□□□ -0.11
NDUFS3O75489 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFS3O75489 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFS3O75489 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.38□□□□□ -0.11
NDUFS3O75489 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFS3O75489 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFS3O75489 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFS3O75489 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.38□□□□□ -0.11
NDUFS3O75489 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.38□□□□□ -0.11
NDUFS3O75489 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFS3O75489 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFS3O75489 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NDUFS3O75489 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.38□□□□□ -0.11
NDUFS3O75489 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NDUFS3O75489 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFS3O75489 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFS3O75489 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFS3O75489 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFS3O75489 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFS3O75489 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFS3O75489 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFS3O75489 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFS3O75489 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.38□□□□□ -0.11
NDUFS3O75489 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.38□□□□□ -0.11
NDUFS3O75489 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NDUFS3O75489 ST13P19-201ENST00000442505 1124 ntBASIC14.38□□□□□ -0.11
NDUFS3O75489 AC021723.1-201ENST00000486306 515 ntBASIC14.38□□□□□ -0.11
NDUFS3O75489 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFS3O75489 RNA5SP412-201ENST00000516234 123 ntBASIC14.38□□□□□ -0.11
NDUFS3O75489 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.38□□□□□ -0.11
NDUFS3O75489 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
NDUFS3O75489 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.38□□□□□ -0.11
NDUFS3O75489 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFS3O75489 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.38□□□□□ -0.11
NDUFS3O75489 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.38□□□□□ -0.11
NDUFS3O75489 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.38□□□□□ -0.11
NDUFS3O75489 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms