Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM3O75382 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
TRIM3O75382 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TRIM3O75382 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.53□□□□□ -0.24
TRIM3O75382 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.53□□□□□ -0.24
TRIM3O75382 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.53□□□□□ -0.24
TRIM3O75382 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TRIM3O75382 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.53□□□□□ -0.24
TRIM3O75382 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.53□□□□□ -0.24
TRIM3O75382 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
TRIM3O75382 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.53□□□□□ -0.24
TRIM3O75382 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.53□□□□□ -0.24
TRIM3O75382 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.53□□□□□ -0.24
TRIM3O75382 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
TRIM3O75382 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.53□□□□□ -0.24
TRIM3O75382 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.53□□□□□ -0.24
TRIM3O75382 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.53□□□□□ -0.24
TRIM3O75382 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.53□□□□□ -0.24
TRIM3O75382 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 AL022328.3-201ENST00000607943 679 ntBASIC13.53□□□□□ -0.24
TRIM3O75382 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TRIM3O75382 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.53□□□□□ -0.24
TRIM3O75382 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 AC020907.1-201ENST00000616460 1350 ntBASIC13.53□□□□□ -0.24
TRIM3O75382 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.53□□□□□ -0.24
TRIM3O75382 AC018735.1-201ENST00000437208 1502 ntBASIC13.53□□□□□ -0.24
TRIM3O75382 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.53□□□□□ -0.24
TRIM3O75382 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.53□□□□□ -0.24
TRIM3O75382 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TRIM3O75382 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.53□□□□□ -0.24
TRIM3O75382 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
TRIM3O75382 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRIM3O75382 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.53□□□□□ -0.24
TRIM3O75382 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
TRIM3O75382 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRIM3O75382 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRIM3O75382 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.52□□□□□ -0.24
TRIM3O75382 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.52□□□□□ -0.24
TRIM3O75382 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRIM3O75382 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.52□□□□□ -0.24
TRIM3O75382 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRIM3O75382 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
TRIM3O75382 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRIM3O75382 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRIM3O75382 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
TRIM3O75382 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRIM3O75382 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRIM3O75382 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
TRIM3O75382 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRIM3O75382 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TRIM3O75382 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRIM3O75382 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
TRIM3O75382 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.52□□□□□ -0.25
TRIM3O75382 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TRIM3O75382 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.52□□□□□ -0.25
TRIM3O75382 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRIM3O75382 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.52□□□□□ -0.25
TRIM3O75382 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.52□□□□□ -0.25
TRIM3O75382 TPT1P11-201ENST00000458482 498 ntBASIC13.52□□□□□ -0.25
TRIM3O75382 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.52□□□□□ -0.25
TRIM3O75382 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRIM3O75382 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRIM3O75382 DUX4L46-201ENST00000566845 751 ntBASIC13.52□□□□□ -0.25
TRIM3O75382 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.52□□□□□ -0.25
TRIM3O75382 MIR4783-201ENST00000580343 82 ntBASIC13.52□□□□□ -0.25
TRIM3O75382 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.52□□□□□ -0.25
TRIM3O75382 AC009955.4-201ENST00000597192 544 ntBASIC13.52□□□□□ -0.25
TRIM3O75382 AC243960.2-201ENST00000600996 747 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms